Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
COL4A3BPQ9Y5P4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL4A3BPQ9Y5P4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.43■□□□□ 0.38
COL4A3BPQ9Y5P4 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.43■□□□□ 0.38
COL4A3BPQ9Y5P4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL4A3BPQ9Y5P4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.43■□□□□ 0.38
COL4A3BPQ9Y5P4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.43■□□□□ 0.38
COL4A3BPQ9Y5P4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.43■□□□□ 0.38
COL4A3BPQ9Y5P4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL4A3BPQ9Y5P4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COL4A3BPQ9Y5P4 NFIC-211ENST00000641145 8399 ntBASIC17.43■□□□□ 0.38
COL4A3BPQ9Y5P4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 RN7SL399P-201ENST00000471648 279 ntBASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 AC036164.1-201ENST00000570544 333 ntBASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 CTBP2P3-201ENST00000585629 1255 ntBASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 MIR8072-201ENST00000614241 80 ntBASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 AC009090.5-201ENST00000624886 2285 ntBASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.42■□□□□ 0.38
COL4A3BPQ9Y5P4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 DBET-201ENST00000630918 3363 ntBASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 RN7SL752P-201ENST00000463779 287 ntBASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 AC104596.2-201ENST00000512793 793 ntBASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 CLK3P2-201ENST00000427566 1453 ntBASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A3BPQ9Y5P4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 KRT17P7-201ENST00000451704 1104 ntBASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms