Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 BCRP2-202ENST00000447763 634 ntBASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 AC022210.1-201ENST00000449856 793 ntBASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 AC093433.1-201ENST00000458048 571 ntBASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 BCRP6-201ENST00000510112 632 ntBASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 BCRP7-201ENST00000511549 544 ntBASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 AP001582.1-201ENST00000525856 295 ntBASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 APRT-204ENST00000563655 709 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 IFT20-206ENST00000578122 834 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 IFT20-208ENST00000578985 831 ntTSL 3 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 PFAS-212ENST00000625942 396 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 AC026691.1-201ENST00000602502 2017 ntBASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 AC092127.1-201ENST00000567093 3455 ntBASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 PCDHA1-201ENST00000378133 2726 ntBASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 MFF-204ENST00000353339 2186 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 AC134312.5-201ENST00000568031 1313 ntBASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 CICP13-201ENST00000422015 2789 ntBASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 LBX2-201ENST00000341396 886 ntTSL 3 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 AP001889.1-201ENST00000525414 633 ntBASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 ATF5-205ENST00000600336 682 ntTSL 2 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 AC025181.2-201ENST00000606994 802 ntBASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 MIR6752-201ENST00000618442 71 ntBASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 GPR39-203ENST00000622084 900 ntTSL 5 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00588Q9Y4M8 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
LINC00588Q9Y4M8 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.71
LINC00588Q9Y4M8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC10.65□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms