Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.78■□□□□ 0.6
DENND2AQ9ULE3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.78■□□□□ 0.6
DENND2AQ9ULE3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DENND2AQ9ULE3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 AC022188.1-201ENST00000620960 1664 ntBASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 FO681548.1-201ENST00000455617 1132 ntBASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 AC244669.2-201ENST00000612320 853 ntBASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 AC092850.2-201ENST00000623821 2697 ntBASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
DENND2AQ9ULE3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DENND2AQ9ULE3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.77■□□□□ 0.59
DENND2AQ9ULE3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
DENND2AQ9ULE3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DENND2AQ9ULE3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DENND2AQ9ULE3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DENND2AQ9ULE3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 AC099336.1-201ENST00000417053 1171 ntBASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 HLA-V-201ENST00000429037 534 ntBASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 C2orf27AP3-201ENST00000434123 579 ntBASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 AL354718.3-201ENST00000616414 581 ntBASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 CR382287.1-201ENST00000623954 586 ntBASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 AL033527.4-201ENST00000641026 673 ntBASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DENND2AQ9ULE3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 NUS1P3-201ENST00000423502 862 ntBASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 CSF2RBP1-201ENST00000447905 391 ntBASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 KRT90P-201ENST00000549264 1064 ntBASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DENND2AQ9ULE3 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms