Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 TP73-AS1-210ENST00000637775 1455 ntBASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 SNX33P1-201ENST00000592116 1762 ntBASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 AL450487.1-201ENST00000426799 995 ntBASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 AC009533.2-201ENST00000543664 586 ntBASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 KRT126P-201ENST00000549467 1181 ntBASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 LINC01711-201ENST00000598340 967 ntBASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 AL138831.2-201ENST00000606564 490 ntBASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 IFNL4P1-201ENST00000607083 540 ntBASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 AC010654.1-201ENST00000615722 808 ntBASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.26□□□□□ -0.29
UBQLN2Q9UHD9 NUTM2HP-201ENST00000442076 2498 ntBASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 AC097374.2-201ENST00000618617 1306 ntBASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBQLN2Q9UHD9 RCN1P2-201ENST00000398357 915 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms