Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 KRT8P44-201ENST00000441609 1350 ntBASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 MROH4P-201ENST00000431302 1578 ntBASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 AC004987.2-201ENST00000395959 1148 ntBASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 AL138918.1-201ENST00000568306 659 ntBASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 AC009093.7-201ENST00000623853 1223 ntBASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 AL691432.1-201ENST00000596308 1422 ntBASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LIN7CQ9NUP9 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LIN7CQ9NUP9 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
LIN7CQ9NUP9 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LIN7CQ9NUP9 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LIN7CQ9NUP9 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.02□□□□□ -0.32
LIN7CQ9NUP9 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LIN7CQ9NUP9 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.02□□□□□ -0.32
LIN7CQ9NUP9 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LIN7CQ9NUP9 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.02□□□□□ -0.32
LIN7CQ9NUP9 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LIN7CQ9NUP9 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
LIN7CQ9NUP9 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LIN7CQ9NUP9 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 AC142381.1-201ENST00000426099 345 ntBASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms