Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRTM1Q9HBL6 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.03■□□□□ -0
LRTM1Q9HBL6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LRTM1Q9HBL6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRTM1Q9HBL6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.03■□□□□ -0
LRTM1Q9HBL6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRTM1Q9HBL6 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.03■□□□□ -0
LRTM1Q9HBL6 TARDBPP1-201ENST00000442013 1203 ntBASIC15.03■□□□□ -0
LRTM1Q9HBL6 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.03■□□□□ -0
LRTM1Q9HBL6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRTM1Q9HBL6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.03■□□□□ -0
LRTM1Q9HBL6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.03■□□□□ -0
LRTM1Q9HBL6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.03■□□□□ -0
LRTM1Q9HBL6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.03■□□□□ -0
LRTM1Q9HBL6 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRTM1Q9HBL6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
LRTM1Q9HBL6 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRTM1Q9HBL6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRTM1Q9HBL6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.03■□□□□ -0
LRTM1Q9HBL6 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRTM1Q9HBL6 CICP23-201ENST00000605013 2741 ntBASIC15.03■□□□□ -0
LRTM1Q9HBL6 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRTM1Q9HBL6 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRTM1Q9HBL6 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRTM1Q9HBL6 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRTM1Q9HBL6 OR2I1P-210ENST00000642037 4691 ntBASIC15.03■□□□□ -0
LRTM1Q9HBL6 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
LRTM1Q9HBL6 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
LRTM1Q9HBL6 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRTM1Q9HBL6 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
LRTM1Q9HBL6 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.03■□□□□ -0
LRTM1Q9HBL6 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
LRTM1Q9HBL6 AC013726.1-201ENST00000563747 2285 ntBASIC15.03■□□□□ -0
LRTM1Q9HBL6 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LRTM1Q9HBL6 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.02■□□□□ -0
LRTM1Q9HBL6 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.02■□□□□ -0
LRTM1Q9HBL6 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LRTM1Q9HBL6 AC106881.1-201ENST00000605849 3329 ntBASIC15.02■□□□□ -0
LRTM1Q9HBL6 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.02■□□□□ -0
LRTM1Q9HBL6 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.02■□□□□ -0
LRTM1Q9HBL6 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
LRTM1Q9HBL6 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
LRTM1Q9HBL6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
LRTM1Q9HBL6 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.02■□□□□ -0
LRTM1Q9HBL6 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.02■□□□□ -0
LRTM1Q9HBL6 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
LRTM1Q9HBL6 ZBED1P1-201ENST00000502364 1930 ntBASIC15.02■□□□□ -0
LRTM1Q9HBL6 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LRTM1Q9HBL6 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.02■□□□□ -0
LRTM1Q9HBL6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LRTM1Q9HBL6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.02■□□□□ -0
LRTM1Q9HBL6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LRTM1Q9HBL6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LRTM1Q9HBL6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.02■□□□□ -0
LRTM1Q9HBL6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.02■□□□□ -0
LRTM1Q9HBL6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.02■□□□□ -0
LRTM1Q9HBL6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.02■□□□□ -0
LRTM1Q9HBL6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.02■□□□□ -0
LRTM1Q9HBL6 AC092183.1-201ENST00000469884 875 ntBASIC15.02■□□□□ -0
LRTM1Q9HBL6 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LRTM1Q9HBL6 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.02■□□□□ -0
LRTM1Q9HBL6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.02■□□□□ -0
LRTM1Q9HBL6 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.02■□□□□ -0
LRTM1Q9HBL6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.02■□□□□ -0
LRTM1Q9HBL6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.02■□□□□ -0
LRTM1Q9HBL6 MIR4453-201ENST00000584019 89 ntBASIC15.02■□□□□ -0
LRTM1Q9HBL6 MIR6080-201ENST00000617359 66 ntBASIC15.02■□□□□ -0
LRTM1Q9HBL6 AC009093.7-201ENST00000623853 1223 ntBASIC15.02■□□□□ -0
LRTM1Q9HBL6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRTM1Q9HBL6 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.02□□□□□ -0.01
LRTM1Q9HBL6 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
LRTM1Q9HBL6 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
LRTM1Q9HBL6 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.02□□□□□ -0.01
LRTM1Q9HBL6 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
LRTM1Q9HBL6 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRTM1Q9HBL6 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.02□□□□□ -0.01
LRTM1Q9HBL6 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRTM1Q9HBL6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
LRTM1Q9HBL6 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRTM1Q9HBL6 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LRTM1Q9HBL6 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LRTM1Q9HBL6 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRTM1Q9HBL6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRTM1Q9HBL6 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LRTM1Q9HBL6 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRTM1Q9HBL6 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LRTM1Q9HBL6 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRTM1Q9HBL6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.02□□□□□ -0.01
LRTM1Q9HBL6 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRTM1Q9HBL6 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRTM1Q9HBL6 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRTM1Q9HBL6 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRTM1Q9HBL6 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRTM1Q9HBL6 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRTM1Q9HBL6 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRTM1Q9HBL6 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.01□□□□□ -0.01
LRTM1Q9HBL6 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRTM1Q9HBL6 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRTM1Q9HBL6 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.01□□□□□ -0.01
LRTM1Q9HBL6 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms