Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
FOXP3Q9BZS1 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
FOXP3Q9BZS1 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
FOXP3Q9BZS1 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 AL139010.1-201ENST00000454878 894 ntBASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 MIR6080-201ENST00000617359 66 ntBASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 GRK6P1-201ENST00000400595 1711 ntBASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXP3Q9BZS1 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 AC236430.1-201ENST00000402231 743 ntBASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 KRT8P23-201ENST00000560090 1207 ntBASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.13■□□□□ 0.17
FOXP3Q9BZS1 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms