Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.57■□□□□ 0.24
DDX1Q92499 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
DDX1Q92499 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
DDX1Q92499 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.57■□□□□ 0.24
DDX1Q92499 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.57■□□□□ 0.24
DDX1Q92499 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
DDX1Q92499 AC011495.1-201ENST00000498085 584 ntBASIC16.57■□□□□ 0.24
DDX1Q92499 SPDYE18-201ENST00000510091 1050 ntBASIC16.57■□□□□ 0.24
DDX1Q92499 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.57■□□□□ 0.24
DDX1Q92499 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
DDX1Q92499 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
DDX1Q92499 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.57■□□□□ 0.24
DDX1Q92499 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.57■□□□□ 0.24
DDX1Q92499 AC106886.1-201ENST00000568660 600 ntBASIC16.57■□□□□ 0.24
DDX1Q92499 AL391069.4-201ENST00000609583 481 ntBASIC16.57■□□□□ 0.24
DDX1Q92499 AC008738.7-201ENST00000609744 511 ntBASIC16.57■□□□□ 0.24
DDX1Q92499 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.57■□□□□ 0.24
DDX1Q92499 AC004840.1-201ENST00000636359 365 ntBASIC16.57■□□□□ 0.24
DDX1Q92499 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
DDX1Q92499 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DDX1Q92499 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
DDX1Q92499 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DDX1Q92499 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.57■□□□□ 0.24
DDX1Q92499 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DDX1Q92499 AC011270.2-201ENST00000624293 2550 ntBASIC16.57■□□□□ 0.24
DDX1Q92499 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
DDX1Q92499 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DDX1Q92499 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
DDX1Q92499 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DDX1Q92499 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.57■□□□□ 0.24
DDX1Q92499 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DDX1Q92499 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
DDX1Q92499 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
DDX1Q92499 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
DDX1Q92499 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DDX1Q92499 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.56■□□□□ 0.24
DDX1Q92499 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
DDX1Q92499 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
DDX1Q92499 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
DDX1Q92499 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.56■□□□□ 0.24
DDX1Q92499 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
DDX1Q92499 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DDX1Q92499 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
DDX1Q92499 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.56■□□□□ 0.24
DDX1Q92499 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DDX1Q92499 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DDX1Q92499 MIR1909-201ENST00000411312 80 ntBASIC16.56■□□□□ 0.24
DDX1Q92499 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.56■□□□□ 0.24
DDX1Q92499 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.56■□□□□ 0.24
DDX1Q92499 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.56■□□□□ 0.24
DDX1Q92499 KRT18P43-201ENST00000469825 1281 ntBASIC16.56■□□□□ 0.24
DDX1Q92499 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.56■□□□□ 0.24
DDX1Q92499 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.56■□□□□ 0.24
DDX1Q92499 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.56■□□□□ 0.24
DDX1Q92499 AC140912.1-201ENST00000577171 1054 ntBASIC16.56■□□□□ 0.24
DDX1Q92499 AC000095.1-201ENST00000603208 874 ntBASIC16.56■□□□□ 0.24
DDX1Q92499 AC025181.2-201ENST00000606994 802 ntBASIC16.56■□□□□ 0.24
DDX1Q92499 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
DDX1Q92499 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DDX1Q92499 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
DDX1Q92499 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
DDX1Q92499 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DDX1Q92499 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DDX1Q92499 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DDX1Q92499 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
DDX1Q92499 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.56■□□□□ 0.24
DDX1Q92499 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
DDX1Q92499 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.56■□□□□ 0.24
DDX1Q92499 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
DDX1Q92499 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DDX1Q92499 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DDX1Q92499 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DDX1Q92499 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
DDX1Q92499 BTBD7P1-201ENST00000447253 1453 ntBASIC16.55■□□□□ 0.24
DDX1Q92499 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DDX1Q92499 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
DDX1Q92499 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DDX1Q92499 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.55■□□□□ 0.24
DDX1Q92499 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
DDX1Q92499 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DDX1Q92499 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
DDX1Q92499 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
DDX1Q92499 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DDX1Q92499 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
DDX1Q92499 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
DDX1Q92499 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
DDX1Q92499 GHSR-202ENST00000427970 912 ntBASIC16.55■□□□□ 0.24
DDX1Q92499 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
DDX1Q92499 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.55■□□□□ 0.24
DDX1Q92499 AL589987.1-201ENST00000453380 819 ntBASIC16.55■□□□□ 0.24
DDX1Q92499 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DDX1Q92499 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.55■□□□□ 0.24
DDX1Q92499 AL132655.2-201ENST00000596276 594 ntBASIC16.55■□□□□ 0.24
DDX1Q92499 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.55■□□□□ 0.24
DDX1Q92499 AC004790.1-201ENST00000612686 536 ntBASIC16.55■□□□□ 0.24
DDX1Q92499 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DDX1Q92499 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.55■□□□□ 0.24
DDX1Q92499 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
DDX1Q92499 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
DDX1Q92499 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms