Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 IGHV3-42-201ENST00000520410 361 ntBASIC15.28■□□□□ 0.04
ATL1Q8WXF7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 AC100757.3-201ENST00000622361 1406 ntBASIC15.27■□□□□ 0.04
ATL1Q8WXF7 PPT1-215ENST00000641471 2368 ntBASIC15.27■□□□□ 0.04
ATL1Q8WXF7 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 AC073347.1-201ENST00000421633 2643 ntBASIC15.27■□□□□ 0.04
ATL1Q8WXF7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 AC092580.3-201ENST00000430932 139 ntBASIC15.27■□□□□ 0.04
ATL1Q8WXF7 AC241585.1-201ENST00000433527 519 ntBASIC15.27■□□□□ 0.04
ATL1Q8WXF7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATL1Q8WXF7 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATL1Q8WXF7 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATL1Q8WXF7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.27■□□□□ 0.03
ATL1Q8WXF7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
ATL1Q8WXF7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.27■□□□□ 0.03
ATL1Q8WXF7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
ATL1Q8WXF7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATL1Q8WXF7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.27■□□□□ 0.03
ATL1Q8WXF7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.27■□□□□ 0.03
ATL1Q8WXF7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.27■□□□□ 0.03
ATL1Q8WXF7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ATL1Q8WXF7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATL1Q8WXF7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.26■□□□□ 0.03
ATL1Q8WXF7 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATL1Q8WXF7 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
ATL1Q8WXF7 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATL1Q8WXF7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ATL1Q8WXF7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ATL1Q8WXF7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ATL1Q8WXF7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATL1Q8WXF7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
ATL1Q8WXF7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ATL1Q8WXF7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.26■□□□□ 0.03
ATL1Q8WXF7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATL1Q8WXF7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.26■□□□□ 0.03
ATL1Q8WXF7 AC015922.1-201ENST00000421102 1152 ntBASIC15.26■□□□□ 0.03
ATL1Q8WXF7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.26■□□□□ 0.03
ATL1Q8WXF7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.26■□□□□ 0.03
ATL1Q8WXF7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.26■□□□□ 0.03
ATL1Q8WXF7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.26■□□□□ 0.03
ATL1Q8WXF7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ATL1Q8WXF7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATL1Q8WXF7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.26■□□□□ 0.03
ATL1Q8WXF7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
ATL1Q8WXF7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
ATL1Q8WXF7 AL590560.3-201ENST00000623350 461 ntBASIC15.26■□□□□ 0.03
ATL1Q8WXF7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms