Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 EEF1DP4-201ENST00000446006 880 ntBASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 AF238378.1-201ENST00000526806 358 ntBASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 KRT126P-201ENST00000549467 1181 ntBASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CKAP2Q8WWK9 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.52■□□□□ 0.07
CKAP2Q8WWK9 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CKAP2Q8WWK9 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CKAP2Q8WWK9 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.52■□□□□ 0.07
CKAP2Q8WWK9 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CKAP2Q8WWK9 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.52■□□□□ 0.07
CKAP2Q8WWK9 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CKAP2Q8WWK9 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CKAP2Q8WWK9 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CKAP2Q8WWK9 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CKAP2Q8WWK9 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CKAP2Q8WWK9 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CKAP2Q8WWK9 AC018442.1-201ENST00000421439 2061 ntBASIC15.52■□□□□ 0.07
CKAP2Q8WWK9 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 GHSR-202ENST00000427970 912 ntBASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 SAPCD2P3-201ENST00000455031 850 ntBASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 AC012313.10-201ENST00000623509 926 ntBASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms