Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 KRT17P7-201ENST00000451704 1104 ntBASIC13.94□□□□□ -0.18
RNF138Q8WVD3 KRT18P25-201ENST00000508931 1278 ntBASIC13.94□□□□□ -0.18
RNF138Q8WVD3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 AC005034.1-201ENST00000426657 489 ntBASIC13.93□□□□□ -0.18
RNF138Q8WVD3 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 AC022616.1-201ENST00000518688 554 ntBASIC13.93□□□□□ -0.18
RNF138Q8WVD3 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 AL162274.1-201ENST00000617191 1098 ntBASIC13.93□□□□□ -0.18
RNF138Q8WVD3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 AC046158.3-201ENST00000624947 2558 ntBASIC13.93□□□□□ -0.18
RNF138Q8WVD3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 LILRP1-201ENST00000444199 1370 ntBASIC13.93□□□□□ -0.18
RNF138Q8WVD3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RNF138Q8WVD3 AL157414.3-201ENST00000624276 1954 ntBASIC13.92□□□□□ -0.18
RNF138Q8WVD3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF138Q8WVD3 AC106760.1-201ENST00000508690 800 ntBASIC13.92□□□□□ -0.18
RNF138Q8WVD3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms