Protein–RNA interactions for Protein: Q8WUH2

TGFBRAP1, Transforming growth factor-beta receptor-associated protein 1, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBRAP1Q8WUH2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.38■□□□□ 0.53
TGFBRAP1Q8WUH2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.38■□□□□ 0.53
TGFBRAP1Q8WUH2 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TGFBRAP1Q8WUH2 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TGFBRAP1Q8WUH2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TGFBRAP1Q8WUH2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 FAM21FP-201ENST00000426241 1131 ntBASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 RNA5SP412-201ENST00000516234 123 ntBASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 AC007787.1-201ENST00000588095 1583 ntBASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFBRAP1Q8WUH2 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TGFBRAP1Q8WUH2 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TGFBRAP1Q8WUH2 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TGFBRAP1Q8WUH2 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TGFBRAP1Q8WUH2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TGFBRAP1Q8WUH2 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.36■□□□□ 0.53
TGFBRAP1Q8WUH2 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TGFBRAP1Q8WUH2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.36■□□□□ 0.53
TGFBRAP1Q8WUH2 MIR1908-201ENST00000410394 80 ntBASIC18.36■□□□□ 0.53
TGFBRAP1Q8WUH2 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.36■□□□□ 0.53
TGFBRAP1Q8WUH2 AC114812.1-204ENST00000449669 728 ntBASIC18.36■□□□□ 0.53
TGFBRAP1Q8WUH2 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.36■□□□□ 0.53
TGFBRAP1Q8WUH2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.36■□□□□ 0.53
TGFBRAP1Q8WUH2 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.36■□□□□ 0.53
TGFBRAP1Q8WUH2 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.36■□□□□ 0.53
TGFBRAP1Q8WUH2 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.36■□□□□ 0.53
TGFBRAP1Q8WUH2 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.36■□□□□ 0.53
TGFBRAP1Q8WUH2 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.36■□□□□ 0.53
TGFBRAP1Q8WUH2 MIR4538-201ENST00000581377 78 ntBASIC18.36■□□□□ 0.53
TGFBRAP1Q8WUH2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TGFBRAP1Q8WUH2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.36■□□□□ 0.53
TGFBRAP1Q8WUH2 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TGFBRAP1Q8WUH2 AC092850.2-201ENST00000623821 2697 ntBASIC18.36■□□□□ 0.53
TGFBRAP1Q8WUH2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TGFBRAP1Q8WUH2 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TGFBRAP1Q8WUH2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TGFBRAP1Q8WUH2 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TGFBRAP1Q8WUH2 AL365203.3-201ENST00000609742 2057 ntBASIC18.35■□□□□ 0.53
TGFBRAP1Q8WUH2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TGFBRAP1Q8WUH2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
TGFBRAP1Q8WUH2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TGFBRAP1Q8WUH2 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.35■□□□□ 0.53
TGFBRAP1Q8WUH2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.35■□□□□ 0.53
TGFBRAP1Q8WUH2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.35■□□□□ 0.53
TGFBRAP1Q8WUH2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TGFBRAP1Q8WUH2 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TGFBRAP1Q8WUH2 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
TGFBRAP1Q8WUH2 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
TGFBRAP1Q8WUH2 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TGFBRAP1Q8WUH2 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
TGFBRAP1Q8WUH2 ACTBP8-201ENST00000403258 1108 ntBASIC18.35■□□□□ 0.53
TGFBRAP1Q8WUH2 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.35■□□□□ 0.53
TGFBRAP1Q8WUH2 AC004066.1-201ENST00000502488 802 ntBASIC18.35■□□□□ 0.53
TGFBRAP1Q8WUH2 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms