Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 POM121L3P-201ENST00000419331 1163 ntBASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 AP002469.2-201ENST00000531724 424 ntBASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 COL6A4P2-202ENST00000504443 2753 ntBASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 AC089987.1-201ENST00000551654 2209 ntBASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 BX276092.5-203ENST00000456199 560 ntBASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms