Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 AC008060.4-201ENST00000569431 1861 ntBASIC9.48□□□□□ -0.89
SVIPQ8NHG7 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 LINC01345-203ENST00000635247 1646 ntTSL 5 BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 NIF3L1-204ENST00000409357 1679 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 AL031714.1-201ENST00000567829 2926 ntTSL 5 BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 TMPRSS7-203ENST00000452346 2616 ntTSL 5 BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 AC099792.1-202ENST00000635290 2012 ntTSL 5 BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 AC026333.3-201ENST00000543611 1731 ntTSL 4 BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 COX19-201ENST00000344111 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 CLEC4M-203ENST00000334806 1781 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 MYO5B-201ENST00000285039 9505 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 TNIP1-201ENST00000315050 2785 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 AL031123.3-201ENST00000623345 1837 ntBASIC9.47□□□□□ -0.89
SVIPQ8NHG7 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 DCAF6-204ENST00000432587 3522 ntTSL 2 BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 TP63-209ENST00000437221 2500 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 MKNK2-213ENST00000591601 3582 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 ZWINT-203ENST00000373944 1872 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 ITPRIP-203ENST00000358187 3981 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 MSRB3-201ENST00000308259 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 AC074194.2-201ENST00000636429 2348 ntBASIC9.47□□□□□ -0.89
SVIPQ8NHG7 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 AC068138.1-201ENST00000412635 217 ntBASIC9.47□□□□□ -0.89
SVIPQ8NHG7 AC114982.2-201ENST00000461396 358 ntBASIC9.47□□□□□ -0.89
SVIPQ8NHG7 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 SLC45A4-201ENST00000024061 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 FERMT1-204ENST00000536936 3229 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 CRTAM-201ENST00000227348 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 MELK-201ENST00000298048 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 ZIK1-202ENST00000536878 4144 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 SLC7A3-201ENST00000298085 2235 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 AC079354.1-201ENST00000409819 3093 ntTSL 2 BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
SVIPQ8NHG7 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
SVIPQ8NHG7 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
SVIPQ8NHG7 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC9.46□□□□□ -0.89
SVIPQ8NHG7 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
SVIPQ8NHG7 RTEL1P1-201ENST00000504490 3685 ntBASIC9.46□□□□□ -0.89
SVIPQ8NHG7 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
SVIPQ8NHG7 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
SVIPQ8NHG7 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC9.46□□□□□ -0.89
SVIPQ8NHG7 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
SVIPQ8NHG7 IL1R2-201ENST00000332549 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SVIPQ8NHG7 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC9.46□□□□□ -0.89
SVIPQ8NHG7 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC9.46□□□□□ -0.89
SVIPQ8NHG7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SVIPQ8NHG7 HHIPL2-201ENST00000343410 2575 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SVIPQ8NHG7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SVIPQ8NHG7 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
SVIPQ8NHG7 GOLGA8IP-202ENST00000611635 2100 ntBASIC9.46□□□□□ -0.89
SVIPQ8NHG7 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SVIPQ8NHG7 SMARCA1-201ENST00000371121 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
SVIPQ8NHG7 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
SVIPQ8NHG7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC9.46□□□□□ -0.89
SVIPQ8NHG7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms