Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
KDM1BQ8NB78 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KDM1BQ8NB78 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KDM1BQ8NB78 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
KDM1BQ8NB78 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
KDM1BQ8NB78 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KDM1BQ8NB78 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
KDM1BQ8NB78 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
KDM1BQ8NB78 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 AC079776.1-201ENST00000401540 1152 ntBASIC15.89■□□□□ 0.13
KDM1BQ8NB78 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 ATP5G2P4-201ENST00000442175 420 ntBASIC15.89■□□□□ 0.13
KDM1BQ8NB78 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 KRT17P8-201ENST00000540749 863 ntBASIC15.89■□□□□ 0.13
KDM1BQ8NB78 AL359711.2-201ENST00000563105 872 ntBASIC15.89■□□□□ 0.13
KDM1BQ8NB78 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 RPSAP52-203ENST00000622976 1023 ntBASIC15.89■□□□□ 0.13
KDM1BQ8NB78 CU634019.7-201ENST00000624153 1185 ntBASIC15.89■□□□□ 0.13
KDM1BQ8NB78 FP236241.2-201ENST00000624906 1185 ntBASIC15.89■□□□□ 0.13
KDM1BQ8NB78 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.89■□□□□ 0.13
KDM1BQ8NB78 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.89■□□□□ 0.13
KDM1BQ8NB78 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 BOLA2P3-201ENST00000404566 256 ntBASIC15.88■□□□□ 0.13
KDM1BQ8NB78 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 AC026410.3-201ENST00000514280 936 ntBASIC15.88■□□□□ 0.13
KDM1BQ8NB78 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 MIR6752-201ENST00000618442 71 ntBASIC15.88■□□□□ 0.13
KDM1BQ8NB78 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.88■□□□□ 0.13
KDM1BQ8NB78 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KDM1BQ8NB78 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms