Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
XRN1Q8IZH2 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
XRN1Q8IZH2 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
XRN1Q8IZH2 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC21.03■□□□□ 0.96
XRN1Q8IZH2 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC21.03■□□□□ 0.96
XRN1Q8IZH2 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC21.03■□□□□ 0.96
XRN1Q8IZH2 AC005632.3-201ENST00000605544 308 ntBASIC21.03■□□□□ 0.96
XRN1Q8IZH2 CMC2-224ENST00000630396 481 ntTSL 5 BASIC21.03■□□□□ 0.96
XRN1Q8IZH2 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC21.03■□□□□ 0.96
XRN1Q8IZH2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
XRN1Q8IZH2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
XRN1Q8IZH2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
XRN1Q8IZH2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
XRN1Q8IZH2 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
XRN1Q8IZH2 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
XRN1Q8IZH2 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
XRN1Q8IZH2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
XRN1Q8IZH2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
XRN1Q8IZH2 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
XRN1Q8IZH2 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
XRN1Q8IZH2 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
XRN1Q8IZH2 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
XRN1Q8IZH2 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC21.02■□□□□ 0.96
XRN1Q8IZH2 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC21.02■□□□□ 0.96
XRN1Q8IZH2 AL157407.1-201ENST00000435784 904 ntBASIC21.02■□□□□ 0.96
XRN1Q8IZH2 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC21.02■□□□□ 0.96
XRN1Q8IZH2 RBM8B-201ENST00000555532 525 ntBASIC21.02■□□□□ 0.96
XRN1Q8IZH2 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
XRN1Q8IZH2 AC026803.1-201ENST00000569130 274 ntBASIC21.02■□□□□ 0.96
XRN1Q8IZH2 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
XRN1Q8IZH2 MIR4649-201ENST00000582839 64 ntBASIC21.02■□□□□ 0.96
XRN1Q8IZH2 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC21.02■□□□□ 0.96
XRN1Q8IZH2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
XRN1Q8IZH2 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
XRN1Q8IZH2 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
XRN1Q8IZH2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
XRN1Q8IZH2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
XRN1Q8IZH2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
XRN1Q8IZH2 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
XRN1Q8IZH2 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC21.02■□□□□ 0.95
XRN1Q8IZH2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
XRN1Q8IZH2 SLC9A7P1-202ENST00000556476 2239 ntBASIC21.02■□□□□ 0.95
XRN1Q8IZH2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
XRN1Q8IZH2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
XRN1Q8IZH2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
XRN1Q8IZH2 AC239868.1-201ENST00000369385 493 ntBASIC21.01■□□□□ 0.95
XRN1Q8IZH2 RPS9P1-201ENST00000419943 583 ntBASIC21.01■□□□□ 0.95
XRN1Q8IZH2 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
XRN1Q8IZH2 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC21.01■□□□□ 0.95
XRN1Q8IZH2 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC21.01■□□□□ 0.95
XRN1Q8IZH2 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC21.01■□□□□ 0.95
XRN1Q8IZH2 GMFG-209ENST00000600322 622 ntTSL 5 BASIC21.01■□□□□ 0.95
XRN1Q8IZH2 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC21.01■□□□□ 0.95
XRN1Q8IZH2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
XRN1Q8IZH2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
XRN1Q8IZH2 AC020910.5-201ENST00000623668 1865 ntBASIC21.01■□□□□ 0.95
XRN1Q8IZH2 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC21.01■□□□□ 0.95
XRN1Q8IZH2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC21.01■□□□□ 0.95
XRN1Q8IZH2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
XRN1Q8IZH2 ZBTB45P1-201ENST00000452761 1456 ntBASIC21.01■□□□□ 0.95
XRN1Q8IZH2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC21.01■□□□□ 0.95
XRN1Q8IZH2 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
XRN1Q8IZH2 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC21.01■□□□□ 0.95
XRN1Q8IZH2 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC21.01■□□□□ 0.95
XRN1Q8IZH2 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
XRN1Q8IZH2 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
XRN1Q8IZH2 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
XRN1Q8IZH2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
XRN1Q8IZH2 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
XRN1Q8IZH2 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC21■□□□□ 0.95
XRN1Q8IZH2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC21■□□□□ 0.95
XRN1Q8IZH2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
XRN1Q8IZH2 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
XRN1Q8IZH2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC21■□□□□ 0.95
XRN1Q8IZH2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC21■□□□□ 0.95
XRN1Q8IZH2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
XRN1Q8IZH2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
XRN1Q8IZH2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
XRN1Q8IZH2 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
XRN1Q8IZH2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
XRN1Q8IZH2 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC21■□□□□ 0.95
XRN1Q8IZH2 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
XRN1Q8IZH2 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC21■□□□□ 0.95
XRN1Q8IZH2 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
XRN1Q8IZH2 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
XRN1Q8IZH2 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
XRN1Q8IZH2 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
XRN1Q8IZH2 AC012441.2-201ENST00000444843 739 ntBASIC21■□□□□ 0.95
XRN1Q8IZH2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC21■□□□□ 0.95
XRN1Q8IZH2 SCARNA21-201ENST00000517026 139 ntBASIC21■□□□□ 0.95
XRN1Q8IZH2 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC21■□□□□ 0.95
XRN1Q8IZH2 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
XRN1Q8IZH2 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC21■□□□□ 0.95
XRN1Q8IZH2 HPN-206ENST00000597419 1212 ntTSL 5 BASIC21■□□□□ 0.95
XRN1Q8IZH2 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC21■□□□□ 0.95
XRN1Q8IZH2 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC21■□□□□ 0.95
XRN1Q8IZH2 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC21■□□□□ 0.95
XRN1Q8IZH2 CYP4F23P-201ENST00000593402 1579 ntBASIC21■□□□□ 0.95
XRN1Q8IZH2 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
XRN1Q8IZH2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms