Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 AC055876.3-201ENST00000431496 288 ntBASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 AC241585.1-201ENST00000433527 519 ntBASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 AC092183.1-201ENST00000469884 875 ntBASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 SDHAP3-202ENST00000515467 728 ntBASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 AC044860.1-202ENST00000559481 777 ntBASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 LINC01115-203ENST00000606068 577 ntBASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 AC138649.4-201ENST00000612222 287 ntBASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 AC022726.2-201ENST00000634673 547 ntBASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 AC006486.2-201ENST00000624246 2199 ntBASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 AC023157.3-201ENST00000619086 2088 ntBASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 SLED1-202ENST00000512051 380 ntBASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 AL844908.2-201ENST00000609461 460 ntBASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC116Q8IYX3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 AC074044.1-201ENST00000609673 707 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms