Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 RN7SL837P-201ENST00000463010 287 ntBASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 CU634019.7-201ENST00000624153 1185 ntBASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 FP236241.2-201ENST00000624906 1185 ntBASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 CICP11-201ENST00000434745 2827 ntBASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 GAPDHP21-201ENST00000450301 1010 ntBASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 AC011495.1-201ENST00000498085 584 ntBASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 AC093813.1-201ENST00000605066 256 ntBASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 IGHV3-72-202ENST00000621503 303 ntBASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 RPSAP52-203ENST00000622976 1023 ntBASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf40Q8IXQ3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms