Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 NDUFV2P1-201ENST00000596415 907 ntBASIC16.81■□□□□ 0.28
HERC6Q8IVU3 AL451050.2-201ENST00000606967 682 ntBASIC16.81■□□□□ 0.28
HERC6Q8IVU3 AC008741.2-201ENST00000612792 3115 ntBASIC16.81■□□□□ 0.28
HERC6Q8IVU3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 AL138799.1-201ENST00000448213 1675 ntBASIC16.81■□□□□ 0.28
HERC6Q8IVU3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HERC6Q8IVU3 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 AC126915.1-201ENST00000522847 1038 ntBASIC16.8■□□□□ 0.28
HERC6Q8IVU3 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 MIR4706-201ENST00000582134 82 ntBASIC16.8■□□□□ 0.28
HERC6Q8IVU3 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 BX539320.1-201ENST00000623759 877 ntBASIC16.8■□□□□ 0.28
HERC6Q8IVU3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HERC6Q8IVU3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.79■□□□□ 0.28
HERC6Q8IVU3 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 ECM1P1-201ENST00000604092 1279 ntBASIC16.79■□□□□ 0.28
HERC6Q8IVU3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HERC6Q8IVU3 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.78■□□□□ 0.28
HERC6Q8IVU3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.78■□□□□ 0.28
HERC6Q8IVU3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.78■□□□□ 0.28
HERC6Q8IVU3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms