Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AC132938.4-201ENST00000623835 848 ntBASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13BQ7Z7G8 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 B9D1-203ENST00000395615 805 ntTSL 3 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 AL139008.1-201ENST00000437894 228 ntBASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 AC019193.1-201ENST00000506678 823 ntBASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 MIR6842-201ENST00000612539 65 ntBASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 AC051619.9-201ENST00000623237 597 ntBASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 AL391005.1-201ENST00000623953 2435 ntBASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 AC114812.1-204ENST00000449669 728 ntBASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 RPL18P13-201ENST00000478088 569 ntBASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 NAT9-211ENST00000580632 799 ntTSL 3 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC9.38□□□□□ -0.91
VPS13BQ7Z7G8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 BLK-205ENST00000529894 2017 ntTSL 5 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 SAMD11P1-201ENST00000571429 661 ntBASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 AC007881.3-201ENST00000608897 607 ntBASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 AL023803.2-201ENST00000620080 638 ntBASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 PCDHA1-201ENST00000378133 2726 ntBASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 RN7SKP214-201ENST00000364208 315 ntBASIC9.37□□□□□ -0.91
VPS13BQ7Z7G8 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC9.37□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms