Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHFQ7M4L6 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHFQ7M4L6 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHFQ7M4L6 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHFQ7M4L6 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHFQ7M4L6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHFQ7M4L6 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHFQ7M4L6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHFQ7M4L6 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHFQ7M4L6 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHFQ7M4L6 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHFQ7M4L6 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHFQ7M4L6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 AC061975.2-201ENST00000581722 295 ntBASIC14.17□□□□□ -0.14
SHFQ7M4L6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHFQ7M4L6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 AC099522.2-201ENST00000607001 744 ntBASIC14.17□□□□□ -0.14
SHFQ7M4L6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHFQ7M4L6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 AC008267.7-201ENST00000624570 1194 ntBASIC14.17□□□□□ -0.14
SHFQ7M4L6 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHFQ7M4L6 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHFQ7M4L6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHFQ7M4L6 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHFQ7M4L6 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHFQ7M4L6 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHFQ7M4L6 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHFQ7M4L6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
SHFQ7M4L6 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHFQ7M4L6 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.16□□□□□ -0.14
SHFQ7M4L6 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
SHFQ7M4L6 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHFQ7M4L6 IL9RP2-201ENST00000423948 1312 ntBASIC14.16□□□□□ -0.14
SHFQ7M4L6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHFQ7M4L6 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHFQ7M4L6 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
SHFQ7M4L6 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
SHFQ7M4L6 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHFQ7M4L6 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHFQ7M4L6 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SHFQ7M4L6 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SHFQ7M4L6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SHFQ7M4L6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHFQ7M4L6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
SHFQ7M4L6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SHFQ7M4L6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.16□□□□□ -0.14
SHFQ7M4L6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.16□□□□□ -0.14
SHFQ7M4L6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.16□□□□□ -0.14
SHFQ7M4L6 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.16□□□□□ -0.14
SHFQ7M4L6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.16□□□□□ -0.14
SHFQ7M4L6 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.16□□□□□ -0.14
SHFQ7M4L6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHFQ7M4L6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SHFQ7M4L6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.16□□□□□ -0.14
SHFQ7M4L6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHFQ7M4L6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.16□□□□□ -0.14
SHFQ7M4L6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.16□□□□□ -0.14
SHFQ7M4L6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.16□□□□□ -0.14
SHFQ7M4L6 AC027601.4-201ENST00000611259 610 ntBASIC14.16□□□□□ -0.14
SHFQ7M4L6 AL513190.1-201ENST00000621254 727 ntBASIC14.16□□□□□ -0.14
SHFQ7M4L6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
SHFQ7M4L6 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.16□□□□□ -0.14
SHFQ7M4L6 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SHFQ7M4L6 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SHFQ7M4L6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHFQ7M4L6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHFQ7M4L6 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHFQ7M4L6 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHFQ7M4L6 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHFQ7M4L6 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.16□□□□□ -0.14
SHFQ7M4L6 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHFQ7M4L6 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHFQ7M4L6 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms