Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FREM1Q5H8C1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FREM1Q5H8C1 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FREM1Q5H8C1 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.63□□□□□ -0.23
FREM1Q5H8C1 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
FREM1Q5H8C1 TMBIM7P-203ENST00000641617 1718 ntBASIC13.63□□□□□ -0.23
FREM1Q5H8C1 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.63□□□□□ -0.23
FREM1Q5H8C1 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
FREM1Q5H8C1 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
FREM1Q5H8C1 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FREM1Q5H8C1 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 HCG11-201ENST00000411553 5696 ntBASIC13.62□□□□□ -0.23
FREM1Q5H8C1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 DBET-201ENST00000630918 3363 ntBASIC13.62□□□□□ -0.23
FREM1Q5H8C1 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.62□□□□□ -0.23
FREM1Q5H8C1 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 AC017083.2-201ENST00000608069 979 ntBASIC13.62□□□□□ -0.23
FREM1Q5H8C1 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 TDH-203ENST00000531764 1110 ntBASIC13.62□□□□□ -0.23
FREM1Q5H8C1 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 SAMD11P1-201ENST00000571429 661 ntBASIC13.62□□□□□ -0.23
FREM1Q5H8C1 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 AC087481.3-201ENST00000602886 1894 ntBASIC13.62□□□□□ -0.23
FREM1Q5H8C1 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FREM1Q5H8C1 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 AC234783.1-201ENST00000441761 496 ntBASIC13.61□□□□□ -0.23
FREM1Q5H8C1 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 GAPDHP40-201ENST00000505218 1006 ntBASIC13.61□□□□□ -0.23
FREM1Q5H8C1 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms