Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 AC005840.4-201ENST00000541242 2494 ntBASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 AZGP1P1-201ENST00000411909 902 ntBASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 AC241585.1-201ENST00000433527 519 ntBASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 UGT1A2P-201ENST00000454886 866 ntBASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 AC004890.2-204ENST00000481968 304 ntBASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KHDC1Q4VXA5 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
KHDC1Q4VXA5 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
KHDC1Q4VXA5 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.83■□□□□ 0.13
KHDC1Q4VXA5 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
KHDC1Q4VXA5 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
KHDC1Q4VXA5 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
KHDC1Q4VXA5 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
KHDC1Q4VXA5 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 AC010336.2-201ENST00000564226 506 ntBASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
KHDC1Q4VXA5 KRT8P37-201ENST00000451609 1420 ntBASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms