Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.95□□□□□ -0.18
H3F3AP84243 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
H3F3AP84243 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.95□□□□□ -0.18
H3F3AP84243 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.95□□□□□ -0.18
H3F3AP84243 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
H3F3AP84243 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.95□□□□□ -0.18
H3F3AP84243 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3AP84243 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.95□□□□□ -0.18
H3F3AP84243 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3AP84243 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3AP84243 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3AP84243 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3AP84243 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3AP84243 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3AP84243 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
H3F3AP84243 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.95□□□□□ -0.18
H3F3AP84243 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3AP84243 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3AP84243 NORAD-201ENST00000565493 5339 ntBASIC13.95□□□□□ -0.18
H3F3AP84243 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.95□□□□□ -0.18
H3F3AP84243 SLC7A15P-201ENST00000424028 1363 ntBASIC13.95□□□□□ -0.18
H3F3AP84243 AL391825.1-201ENST00000457671 1364 ntBASIC13.95□□□□□ -0.18
H3F3AP84243 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
H3F3AP84243 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3AP84243 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3AP84243 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3AP84243 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3AP84243 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3AP84243 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
H3F3AP84243 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3AP84243 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3AP84243 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.94□□□□□ -0.18
H3F3AP84243 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.94□□□□□ -0.18
H3F3AP84243 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.94□□□□□ -0.18
H3F3AP84243 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3AP84243 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3AP84243 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3AP84243 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3AP84243 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.94□□□□□ -0.18
H3F3AP84243 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.94□□□□□ -0.18
H3F3AP84243 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3AP84243 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.94□□□□□ -0.18
H3F3AP84243 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3AP84243 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.94□□□□□ -0.18
H3F3AP84243 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.94□□□□□ -0.18
H3F3AP84243 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3AP84243 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
H3F3AP84243 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.94□□□□□ -0.18
H3F3AP84243 DFFBP1-201ENST00000433250 979 ntBASIC13.94□□□□□ -0.18
H3F3AP84243 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.94□□□□□ -0.18
H3F3AP84243 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.94□□□□□ -0.18
H3F3AP84243 RN7SL399P-201ENST00000471648 279 ntBASIC13.94□□□□□ -0.18
H3F3AP84243 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3AP84243 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.94□□□□□ -0.18
H3F3AP84243 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.94□□□□□ -0.18
H3F3AP84243 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3AP84243 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3AP84243 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3AP84243 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.94□□□□□ -0.18
H3F3AP84243 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.94□□□□□ -0.18
H3F3AP84243 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3AP84243 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3AP84243 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3AP84243 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3AP84243 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3AP84243 AC023824.1-201ENST00000562945 2975 ntBASIC13.94□□□□□ -0.18
H3F3AP84243 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3AP84243 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3AP84243 PPT1-215ENST00000641471 2368 ntBASIC13.94□□□□□ -0.18
H3F3AP84243 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3AP84243 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3AP84243 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
H3F3AP84243 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3AP84243 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3AP84243 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3AP84243 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
H3F3AP84243 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
H3F3AP84243 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3AP84243 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
H3F3AP84243 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
H3F3AP84243 AC092384.3-202ENST00000564646 2873 ntBASIC13.93□□□□□ -0.18
H3F3AP84243 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3AP84243 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3AP84243 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
H3F3AP84243 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
H3F3AP84243 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.93□□□□□ -0.18
H3F3AP84243 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
H3F3AP84243 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3AP84243 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
H3F3AP84243 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3AP84243 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3AP84243 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
H3F3AP84243 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3AP84243 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3AP84243 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.93□□□□□ -0.18
H3F3AP84243 AL353779.1-201ENST00000434793 351 ntBASIC13.93□□□□□ -0.18
H3F3AP84243 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3AP84243 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.93□□□□□ -0.18
H3F3AP84243 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
H3F3AP84243 AC055876.2-201ENST00000531834 546 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms