Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAE1P78406 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAE1P78406 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.77□□□□□ -0.05
RAE1P78406 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.77□□□□□ -0.05
RAE1P78406 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.77□□□□□ -0.05
RAE1P78406 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAE1P78406 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAE1P78406 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAE1P78406 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAE1P78406 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAE1P78406 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAE1P78406 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAE1P78406 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.77□□□□□ -0.05
RAE1P78406 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAE1P78406 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAE1P78406 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.77□□□□□ -0.05
RAE1P78406 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
RAE1P78406 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAE1P78406 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.76□□□□□ -0.05
RAE1P78406 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.76□□□□□ -0.05
RAE1P78406 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.76□□□□□ -0.05
RAE1P78406 ACE3P-201ENST00000423435 1973 ntBASIC14.76□□□□□ -0.05
RAE1P78406 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.76□□□□□ -0.05
RAE1P78406 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.76□□□□□ -0.05
RAE1P78406 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.76□□□□□ -0.05
RAE1P78406 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.76□□□□□ -0.05
RAE1P78406 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.76□□□□□ -0.05
RAE1P78406 AC104457.1-201ENST00000401024 814 ntBASIC14.76□□□□□ -0.05
RAE1P78406 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.76□□□□□ -0.05
RAE1P78406 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 AC241585.1-201ENST00000433527 519 ntBASIC14.76□□□□□ -0.05
RAE1P78406 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.76□□□□□ -0.05
RAE1P78406 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.76□□□□□ -0.05
RAE1P78406 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RAE1P78406 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 AC092337.1-201ENST00000568699 1129 ntBASIC14.76□□□□□ -0.05
RAE1P78406 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.76□□□□□ -0.05
RAE1P78406 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.76□□□□□ -0.05
RAE1P78406 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.76□□□□□ -0.05
RAE1P78406 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.76□□□□□ -0.05
RAE1P78406 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.76□□□□□ -0.05
RAE1P78406 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.76□□□□□ -0.05
RAE1P78406 REXO1L2P-201ENST00000425429 2069 ntBASIC14.76□□□□□ -0.05
RAE1P78406 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.76□□□□□ -0.05
RAE1P78406 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAE1P78406 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAE1P78406 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.75□□□□□ -0.05
RAE1P78406 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAE1P78406 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.75□□□□□ -0.05
RAE1P78406 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RAE1P78406 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RAE1P78406 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAE1P78406 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.75□□□□□ -0.05
RAE1P78406 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAE1P78406 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAE1P78406 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.75□□□□□ -0.05
RAE1P78406 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAE1P78406 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAE1P78406 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAE1P78406 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RAE1P78406 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAE1P78406 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAE1P78406 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.75□□□□□ -0.05
RAE1P78406 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.75□□□□□ -0.05
RAE1P78406 SPDYE18-201ENST00000510091 1050 ntBASIC14.75□□□□□ -0.05
RAE1P78406 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
RAE1P78406 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.75□□□□□ -0.05
RAE1P78406 AC000095.1-201ENST00000603208 874 ntBASIC14.75□□□□□ -0.05
RAE1P78406 AL645728.2-202ENST00000641679 227 ntBASIC14.75□□□□□ -0.05
RAE1P78406 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAE1P78406 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
RAE1P78406 FGD5P1-202ENST00000614866 2498 ntBASIC14.75□□□□□ -0.05
RAE1P78406 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.75□□□□□ -0.05
RAE1P78406 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAE1P78406 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms