Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEP78395 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.79■□□□□ 0.12
PRAMEP78395 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEP78395 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PRAMEP78395 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PRAMEP78395 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEP78395 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEP78395 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEP78395 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEP78395 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PRAMEP78395 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEP78395 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PRAMEP78395 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEP78395 AL080243.2-201ENST00000418783 582 ntBASIC15.79■□□□□ 0.12
PRAMEP78395 AL645939.2-201ENST00000427340 991 ntBASIC15.79■□□□□ 0.12
PRAMEP78395 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEP78395 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.79■□□□□ 0.12
PRAMEP78395 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.79■□□□□ 0.12
PRAMEP78395 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.79■□□□□ 0.12
PRAMEP78395 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.79■□□□□ 0.12
PRAMEP78395 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.79■□□□□ 0.12
PRAMEP78395 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.79■□□□□ 0.12
PRAMEP78395 AP001160.2-201ENST00000596071 487 ntBASIC15.79■□□□□ 0.12
PRAMEP78395 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.79■□□□□ 0.12
PRAMEP78395 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PRAMEP78395 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.79■□□□□ 0.12
PRAMEP78395 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PRAMEP78395 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.79■□□□□ 0.12
PRAMEP78395 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.79■□□□□ 0.12
PRAMEP78395 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.79■□□□□ 0.12
PRAMEP78395 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.79■□□□□ 0.12
PRAMEP78395 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.79■□□□□ 0.12
PRAMEP78395 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PRAMEP78395 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
PRAMEP78395 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEP78395 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.79■□□□□ 0.12
PRAMEP78395 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEP78395 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.78■□□□□ 0.12
PRAMEP78395 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.78■□□□□ 0.12
PRAMEP78395 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PRAMEP78395 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PRAMEP78395 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.78■□□□□ 0.12
PRAMEP78395 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PRAMEP78395 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 FO538757.1-201ENST00000623083 1397 ntBASIC15.78■□□□□ 0.12
PRAMEP78395 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PRAMEP78395 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PRAMEP78395 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PRAMEP78395 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.78■□□□□ 0.12
PRAMEP78395 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.78■□□□□ 0.12
PRAMEP78395 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.78■□□□□ 0.12
PRAMEP78395 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 HLA-V-204ENST00000476601 1289 ntBASIC15.78■□□□□ 0.12
PRAMEP78395 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.78■□□□□ 0.12
PRAMEP78395 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.78■□□□□ 0.12
PRAMEP78395 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.78■□□□□ 0.12
PRAMEP78395 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.78■□□□□ 0.12
PRAMEP78395 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.78■□□□□ 0.12
PRAMEP78395 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
PRAMEP78395 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.78■□□□□ 0.12
PRAMEP78395 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.78■□□□□ 0.12
PRAMEP78395 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.78■□□□□ 0.12
PRAMEP78395 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PRAMEP78395 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.78■□□□□ 0.12
PRAMEP78395 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.78■□□□□ 0.12
PRAMEP78395 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEP78395 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.77■□□□□ 0.12
PRAMEP78395 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.77■□□□□ 0.12
PRAMEP78395 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEP78395 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEP78395 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
PRAMEP78395 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEP78395 AC138035.3-201ENST00000622706 2791 ntBASIC15.77■□□□□ 0.12
PRAMEP78395 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms