Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH11P55287 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.37□□□□□ -0.11
CDH11P55287 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CDH11P55287 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDH11P55287 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH11P55287 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH11P55287 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.37□□□□□ -0.11
CDH11P55287 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.37□□□□□ -0.11
CDH11P55287 RBPMS2P1-201ENST00000437762 623 ntBASIC14.37□□□□□ -0.11
CDH11P55287 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.37□□□□□ -0.11
CDH11P55287 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.37□□□□□ -0.11
CDH11P55287 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH11P55287 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH11P55287 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.37□□□□□ -0.11
CDH11P55287 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CDH11P55287 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.37□□□□□ -0.11
CDH11P55287 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.37□□□□□ -0.11
CDH11P55287 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.37□□□□□ -0.11
CDH11P55287 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH11P55287 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH11P55287 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH11P55287 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.37□□□□□ -0.11
CDH11P55287 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH11P55287 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDH11P55287 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH11P55287 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.37□□□□□ -0.11
CDH11P55287 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH11P55287 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.37□□□□□ -0.11
CDH11P55287 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH11P55287 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH11P55287 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
CDH11P55287 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH11P55287 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH11P55287 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH11P55287 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH11P55287 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH11P55287 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH11P55287 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH11P55287 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH11P55287 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
CDH11P55287 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CDH11P55287 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH11P55287 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.36□□□□□ -0.11
CDH11P55287 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH11P55287 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH11P55287 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH11P55287 FAM58DP-201ENST00000428076 619 ntBASIC14.36□□□□□ -0.11
CDH11P55287 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH11P55287 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.36□□□□□ -0.11
CDH11P55287 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CDH11P55287 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH11P55287 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH11P55287 AGAP7P-201ENST00000582299 2062 ntBASIC14.36□□□□□ -0.11
CDH11P55287 AGAP14-201ENST00000624701 2060 ntBASIC14.36□□□□□ -0.11
CDH11P55287 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH11P55287 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.36□□□□□ -0.11
CDH11P55287 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CDH11P55287 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH11P55287 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH11P55287 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
CDH11P55287 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH11P55287 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH11P55287 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH11P55287 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CDH11P55287 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH11P55287 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH11P55287 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.35□□□□□ -0.11
CDH11P55287 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH11P55287 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH11P55287 KRT8P44-201ENST00000441609 1350 ntBASIC14.35□□□□□ -0.11
CDH11P55287 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.35□□□□□ -0.11
CDH11P55287 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CDH11P55287 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH11P55287 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH11P55287 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH11P55287 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH11P55287 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.35□□□□□ -0.11
CDH11P55287 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH11P55287 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH11P55287 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH11P55287 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.35□□□□□ -0.11
CDH11P55287 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH11P55287 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.35□□□□□ -0.11
CDH11P55287 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH11P55287 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CDH11P55287 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH11P55287 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.35□□□□□ -0.11
CDH11P55287 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH11P55287 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
CDH11P55287 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
CDH11P55287 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CDH11P55287 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.35□□□□□ -0.11
CDH11P55287 PRYP6-201ENST00000514804 343 ntBASIC14.35□□□□□ -0.11
CDH11P55287 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH11P55287 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CDH11P55287 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.35□□□□□ -0.11
CDH11P55287 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH11P55287 AC027307.2-201ENST00000591252 911 ntBASIC14.35□□□□□ -0.11
CDH11P55287 AP001059.3-201ENST00000619053 235 ntBASIC14.35□□□□□ -0.11
CDH11P55287 AC008267.7-201ENST00000624570 1194 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms