Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
EMP3P54852 KCNMB3-201ENST00000314235 1485 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
EMP3P54852 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
EMP3P54852 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
EMP3P54852 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
EMP3P54852 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
EMP3P54852 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.34■□□□□ 0.05
EMP3P54852 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
EMP3P54852 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
EMP3P54852 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.34■□□□□ 0.05
EMP3P54852 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.34■□□□□ 0.05
EMP3P54852 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
EMP3P54852 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
EMP3P54852 AC004987.2-201ENST00000395959 1148 ntBASIC15.34■□□□□ 0.05
EMP3P54852 MTND6P24-201ENST00000440466 518 ntBASIC15.34■□□□□ 0.05
EMP3P54852 AC093801.2-201ENST00000503966 1050 ntBASIC15.34■□□□□ 0.05
EMP3P54852 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC15.34■□□□□ 0.05
EMP3P54852 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC15.34■□□□□ 0.05
EMP3P54852 AP003716.1-203ENST00000533670 613 ntTSL 3 BASIC15.34■□□□□ 0.05
EMP3P54852 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
EMP3P54852 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC15.34■□□□□ 0.05
EMP3P54852 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC15.34■□□□□ 0.05
EMP3P54852 SPCS2P1-201ENST00000561636 679 ntBASIC15.34■□□□□ 0.05
EMP3P54852 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.34■□□□□ 0.05
EMP3P54852 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.34■□□□□ 0.05
EMP3P54852 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC15.34■□□□□ 0.05
EMP3P54852 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.34■□□□□ 0.05
EMP3P54852 AL138828.2-201ENST00000615812 383 ntBASIC15.34■□□□□ 0.05
EMP3P54852 AL590560.3-201ENST00000623350 461 ntBASIC15.34■□□□□ 0.05
EMP3P54852 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC15.34■□□□□ 0.05
EMP3P54852 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
EMP3P54852 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
EMP3P54852 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
EMP3P54852 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
EMP3P54852 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.34■□□□□ 0.05
EMP3P54852 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.34■□□□□ 0.05
EMP3P54852 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
EMP3P54852 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
EMP3P54852 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
EMP3P54852 AC083899.2-201ENST00000423285 1376 ntBASIC15.34■□□□□ 0.05
EMP3P54852 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
EMP3P54852 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
EMP3P54852 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
EMP3P54852 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
EMP3P54852 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
EMP3P54852 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
EMP3P54852 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
EMP3P54852 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
EMP3P54852 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.33■□□□□ 0.05
EMP3P54852 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
EMP3P54852 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
EMP3P54852 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
EMP3P54852 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.33■□□□□ 0.05
EMP3P54852 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
EMP3P54852 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
EMP3P54852 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
EMP3P54852 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.33■□□□□ 0.04
EMP3P54852 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EMP3P54852 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.33■□□□□ 0.04
EMP3P54852 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
EMP3P54852 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
EMP3P54852 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
EMP3P54852 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EMP3P54852 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EMP3P54852 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
EMP3P54852 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.33■□□□□ 0.04
EMP3P54852 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
EMP3P54852 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
EMP3P54852 KRTAP4-1-201ENST00000398472 1241 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
EMP3P54852 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
EMP3P54852 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC15.33■□□□□ 0.04
EMP3P54852 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
EMP3P54852 SERBP1P3-201ENST00000459980 809 ntBASIC15.33■□□□□ 0.04
EMP3P54852 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
EMP3P54852 ZNF890P-202ENST00000530367 1156 ntBASIC15.33■□□□□ 0.04
EMP3P54852 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.33■□□□□ 0.04
EMP3P54852 NUDT4-205ENST00000548662 765 ntTSL 3 BASIC15.33■□□□□ 0.04
EMP3P54852 LINC02407-202ENST00000553247 1083 ntTSL 3 BASIC15.33■□□□□ 0.04
EMP3P54852 AC243562.2-201ENST00000561247 970 ntBASIC15.33■□□□□ 0.04
EMP3P54852 AC024267.5-201ENST00000579154 599 ntBASIC15.33■□□□□ 0.04
EMP3P54852 KRTAP4-1-202ENST00000620667 737 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
EMP3P54852 AJ011932.1-201ENST00000621707 465 ntBASIC15.33■□□□□ 0.04
EMP3P54852 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EMP3P54852 AC006486.2-201ENST00000624246 2199 ntBASIC15.33■□□□□ 0.04
EMP3P54852 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.33■□□□□ 0.04
EMP3P54852 AC087499.5-201ENST00000452760 1342 ntBASIC15.33■□□□□ 0.04
EMP3P54852 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
EMP3P54852 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
EMP3P54852 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.33■□□□□ 0.04
EMP3P54852 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EMP3P54852 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.33■□□□□ 0.04
EMP3P54852 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EMP3P54852 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
EMP3P54852 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
EMP3P54852 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
EMP3P54852 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EMP3P54852 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.33■□□□□ 0.04
EMP3P54852 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
EMP3P54852 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EMP3P54852 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms