Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
EPHA4P54764 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.99□□□□□ -0.01
EPHA4P54764 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.99□□□□□ -0.01
EPHA4P54764 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
EPHA4P54764 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
EPHA4P54764 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.99□□□□□ -0.01
EPHA4P54764 AC092933.1-201ENST00000393644 945 ntBASIC14.99□□□□□ -0.01
EPHA4P54764 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.99□□□□□ -0.01
EPHA4P54764 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.99□□□□□ -0.01
EPHA4P54764 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
EPHA4P54764 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.99□□□□□ -0.01
EPHA4P54764 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
EPHA4P54764 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
EPHA4P54764 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.99□□□□□ -0.01
EPHA4P54764 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
EPHA4P54764 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.99□□□□□ -0.01
EPHA4P54764 SNX29P1-201ENST00000548357 1007 ntBASIC14.99□□□□□ -0.01
EPHA4P54764 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.99□□□□□ -0.01
EPHA4P54764 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.99□□□□□ -0.01
EPHA4P54764 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.99□□□□□ -0.01
EPHA4P54764 AP005019.2-201ENST00000615104 511 ntBASIC14.99□□□□□ -0.01
EPHA4P54764 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
EPHA4P54764 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
EPHA4P54764 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.99□□□□□ -0.01
EPHA4P54764 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
EPHA4P54764 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
EPHA4P54764 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.99□□□□□ -0.01
EPHA4P54764 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
EPHA4P54764 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
EPHA4P54764 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
EPHA4P54764 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.99□□□□□ -0.01
EPHA4P54764 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
EPHA4P54764 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
EPHA4P54764 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
EPHA4P54764 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
EPHA4P54764 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.99□□□□□ -0.01
EPHA4P54764 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
EPHA4P54764 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
EPHA4P54764 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
EPHA4P54764 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
EPHA4P54764 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.99□□□□□ -0.01
EPHA4P54764 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
EPHA4P54764 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EPHA4P54764 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EPHA4P54764 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.98□□□□□ -0.01
EPHA4P54764 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
EPHA4P54764 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
EPHA4P54764 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
EPHA4P54764 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EPHA4P54764 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.98□□□□□ -0.01
EPHA4P54764 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
EPHA4P54764 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.98□□□□□ -0.01
EPHA4P54764 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
EPHA4P54764 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.98□□□□□ -0.01
EPHA4P54764 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EPHA4P54764 AL138799.1-201ENST00000448213 1675 ntBASIC14.98□□□□□ -0.01
EPHA4P54764 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EPHA4P54764 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
EPHA4P54764 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
EPHA4P54764 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.98□□□□□ -0.01
EPHA4P54764 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.98□□□□□ -0.01
EPHA4P54764 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.98□□□□□ -0.01
EPHA4P54764 AP001582.1-201ENST00000525856 295 ntBASIC14.98□□□□□ -0.01
EPHA4P54764 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
EPHA4P54764 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.98□□□□□ -0.01
EPHA4P54764 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.98□□□□□ -0.01
EPHA4P54764 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.98□□□□□ -0.01
EPHA4P54764 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.98□□□□□ -0.01
EPHA4P54764 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.98□□□□□ -0.01
EPHA4P54764 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
EPHA4P54764 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EPHA4P54764 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
EPHA4P54764 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EPHA4P54764 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.98□□□□□ -0.01
EPHA4P54764 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EPHA4P54764 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.98□□□□□ -0.01
EPHA4P54764 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
EPHA4P54764 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
EPHA4P54764 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
EPHA4P54764 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
EPHA4P54764 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.97□□□□□ -0.01
EPHA4P54764 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
EPHA4P54764 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
EPHA4P54764 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.97□□□□□ -0.01
EPHA4P54764 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
EPHA4P54764 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
EPHA4P54764 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
EPHA4P54764 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
EPHA4P54764 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.97□□□□□ -0.01
EPHA4P54764 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
EPHA4P54764 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.97□□□□□ -0.01
EPHA4P54764 RPL7P3-201ENST00000441388 714 ntBASIC14.97□□□□□ -0.01
EPHA4P54764 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
EPHA4P54764 CTBP2P5-201ENST00000454986 1264 ntBASIC14.97□□□□□ -0.01
EPHA4P54764 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
EPHA4P54764 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.97□□□□□ -0.01
EPHA4P54764 KRT18P25-201ENST00000508931 1278 ntBASIC14.97□□□□□ -0.01
EPHA4P54764 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.97□□□□□ -0.01
EPHA4P54764 AP000812.2-201ENST00000538934 718 ntBASIC14.97□□□□□ -0.01
EPHA4P54764 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms