Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SMSP52788 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
SMSP52788 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMSP52788 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMSP52788 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMSP52788 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.69□□□□□ -0.06
SMSP52788 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.69□□□□□ -0.06
SMSP52788 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.69□□□□□ -0.06
SMSP52788 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SMSP52788 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.69□□□□□ -0.06
SMSP52788 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.69□□□□□ -0.06
SMSP52788 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
SMSP52788 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.69□□□□□ -0.06
SMSP52788 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.69□□□□□ -0.06
SMSP52788 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.69□□□□□ -0.06
SMSP52788 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMSP52788 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.69□□□□□ -0.06
SMSP52788 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.68□□□□□ -0.06
SMSP52788 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 AC138035.3-201ENST00000622706 2791 ntBASIC14.68□□□□□ -0.06
SMSP52788 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.68□□□□□ -0.06
SMSP52788 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.68□□□□□ -0.06
SMSP52788 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.68□□□□□ -0.06
SMSP52788 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.68□□□□□ -0.06
SMSP52788 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SMSP52788 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.68□□□□□ -0.06
SMSP52788 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.68□□□□□ -0.06
SMSP52788 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.68□□□□□ -0.06
SMSP52788 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SMSP52788 AC098614.1-201ENST00000368528 745 ntBASIC14.68□□□□□ -0.06
SMSP52788 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SMSP52788 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.68□□□□□ -0.06
SMSP52788 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SMSP52788 AL353779.1-201ENST00000434793 351 ntBASIC14.68□□□□□ -0.06
SMSP52788 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.68□□□□□ -0.06
SMSP52788 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
SMSP52788 GPR53P-205ENST00000457298 1084 ntBASIC14.68□□□□□ -0.06
SMSP52788 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.68□□□□□ -0.06
SMSP52788 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.68□□□□□ -0.06
SMSP52788 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.68□□□□□ -0.06
SMSP52788 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.68□□□□□ -0.06
SMSP52788 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.68□□□□□ -0.06
SMSP52788 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.68□□□□□ -0.06
SMSP52788 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.68□□□□□ -0.06
SMSP52788 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.68□□□□□ -0.06
SMSP52788 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.68□□□□□ -0.06
SMSP52788 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SMSP52788 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.68□□□□□ -0.06
SMSP52788 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.68□□□□□ -0.06
SMSP52788 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.68□□□□□ -0.06
SMSP52788 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.68□□□□□ -0.06
SMSP52788 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMSP52788 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 AC087499.5-201ENST00000452760 1342 ntBASIC14.67□□□□□ -0.06
SMSP52788 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.67□□□□□ -0.06
SMSP52788 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.67□□□□□ -0.06
SMSP52788 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.67□□□□□ -0.06
SMSP52788 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
SMSP52788 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
SMSP52788 OR2I1P-209ENST00000641730 5365 ntBASIC14.67□□□□□ -0.06
SMSP52788 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.67□□□□□ -0.06
SMSP52788 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.67□□□□□ -0.06
SMSP52788 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms