Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC19.5■□□□□ 0.71
COL15A1P39059 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC19.5■□□□□ 0.71
COL15A1P39059 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
COL15A1P39059 COX5BP1-201ENST00000507622 393 ntBASIC19.5■□□□□ 0.71
COL15A1P39059 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC19.5■□□□□ 0.71
COL15A1P39059 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
COL15A1P39059 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC19.5■□□□□ 0.71
COL15A1P39059 MIR3619-201ENST00000579667 83 ntBASIC19.5■□□□□ 0.71
COL15A1P39059 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC19.5■□□□□ 0.71
COL15A1P39059 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
COL15A1P39059 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL15A1P39059 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL15A1P39059 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL15A1P39059 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL15A1P39059 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
COL15A1P39059 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL15A1P39059 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL15A1P39059 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL15A1P39059 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC19.49■□□□□ 0.71
COL15A1P39059 AC007787.1-201ENST00000588095 1583 ntBASIC19.49■□□□□ 0.71
COL15A1P39059 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.49■□□□□ 0.71
COL15A1P39059 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL15A1P39059 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL15A1P39059 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
COL15A1P39059 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL15A1P39059 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.49■□□□□ 0.71
COL15A1P39059 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL15A1P39059 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
COL15A1P39059 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC19.49■□□□□ 0.71
COL15A1P39059 AC016700.1-201ENST00000429424 312 ntBASIC19.49■□□□□ 0.71
COL15A1P39059 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC19.49■□□□□ 0.71
COL15A1P39059 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL15A1P39059 AC044849.1-201ENST00000519737 1188 ntBASIC19.49■□□□□ 0.71
COL15A1P39059 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
COL15A1P39059 RERG-205ENST00000537647 935 ntTSL 2 BASIC19.49■□□□□ 0.71
COL15A1P39059 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC19.49■□□□□ 0.71
COL15A1P39059 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC19.49■□□□□ 0.71
COL15A1P39059 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC19.49■□□□□ 0.71
COL15A1P39059 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL15A1P39059 AC244157.2-201ENST00000616239 1006 ntBASIC19.49■□□□□ 0.71
COL15A1P39059 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
COL15A1P39059 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
COL15A1P39059 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL15A1P39059 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL15A1P39059 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL15A1P39059 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL15A1P39059 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC19.49■□□□□ 0.71
COL15A1P39059 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
COL15A1P39059 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL15A1P39059 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC19.49■□□□□ 0.71
COL15A1P39059 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL15A1P39059 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC19.48■□□□□ 0.71
COL15A1P39059 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL15A1P39059 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL15A1P39059 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL15A1P39059 AL645937.2-201ENST00000396808 931 ntBASIC19.48■□□□□ 0.71
COL15A1P39059 POM121L8P-201ENST00000417732 1281 ntBASIC19.48■□□□□ 0.71
COL15A1P39059 HNRNPA1P63-201ENST00000427917 963 ntBASIC19.48■□□□□ 0.71
COL15A1P39059 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC19.48■□□□□ 0.71
COL15A1P39059 POM121L9P-203ENST00000441984 1285 ntBASIC19.48■□□□□ 0.71
COL15A1P39059 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.48■□□□□ 0.71
COL15A1P39059 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC19.48■□□□□ 0.71
COL15A1P39059 RN7SL713P-201ENST00000582127 302 ntBASIC19.48■□□□□ 0.71
COL15A1P39059 AC007663.3-201ENST00000609632 465 ntBASIC19.48■□□□□ 0.71
COL15A1P39059 AC138649.2-201ENST00000615886 705 ntBASIC19.48■□□□□ 0.71
COL15A1P39059 AL645728.2-202ENST00000641679 227 ntBASIC19.48■□□□□ 0.71
COL15A1P39059 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL15A1P39059 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.48■□□□□ 0.71
COL15A1P39059 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC19.48■□□□□ 0.71
COL15A1P39059 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC19.48■□□□□ 0.71
COL15A1P39059 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL15A1P39059 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC19.48■□□□□ 0.71
COL15A1P39059 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.48■□□□□ 0.71
COL15A1P39059 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.48■□□□□ 0.71
COL15A1P39059 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
COL15A1P39059 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.48■□□□□ 0.71
COL15A1P39059 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL15A1P39059 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.48■□□□□ 0.71
COL15A1P39059 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
COL15A1P39059 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
COL15A1P39059 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL15A1P39059 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL15A1P39059 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC19.47■□□□□ 0.71
COL15A1P39059 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL15A1P39059 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC19.47■□□□□ 0.71
COL15A1P39059 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL15A1P39059 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.47■□□□□ 0.71
COL15A1P39059 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL15A1P39059 NDUFAB1P1-201ENST00000404262 460 ntBASIC19.47■□□□□ 0.71
COL15A1P39059 SERPINA13P-202ENST00000478994 924 ntBASIC19.47■□□□□ 0.71
COL15A1P39059 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC19.47■□□□□ 0.71
COL15A1P39059 AC004066.1-201ENST00000502488 802 ntBASIC19.47■□□□□ 0.71
COL15A1P39059 NCK2-206ENST00000522586 490 ntTSL 5 BASIC19.47■□□□□ 0.71
COL15A1P39059 AC005730.2-201ENST00000564549 1184 ntBASIC19.47■□□□□ 0.71
COL15A1P39059 OR10B1P-201ENST00000601666 907 ntBASIC19.47■□□□□ 0.71
COL15A1P39059 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL15A1P39059 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL15A1P39059 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL15A1P39059 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL15A1P39059 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms