Protein–RNA interactions for Protein: P35247

SFTPD, Pulmonary surfactant-associated protein D, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPDP35247 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SFTPDP35247 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.16□□□□□ -0.14
SFTPDP35247 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SFTPDP35247 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPDP35247 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SFTPDP35247 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.16□□□□□ -0.14
SFTPDP35247 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPDP35247 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
SFTPDP35247 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.16□□□□□ -0.14
SFTPDP35247 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SFTPDP35247 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPDP35247 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SFTPDP35247 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPDP35247 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SFTPDP35247 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.16□□□□□ -0.14
SFTPDP35247 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPDP35247 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.16□□□□□ -0.14
SFTPDP35247 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SFTPDP35247 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SFTPDP35247 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SFTPDP35247 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPDP35247 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPDP35247 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPDP35247 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SFTPDP35247 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPDP35247 TERF1P3-201ENST00000505638 1227 ntBASIC14.16□□□□□ -0.14
SFTPDP35247 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.16□□□□□ -0.14
SFTPDP35247 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.16□□□□□ -0.14
SFTPDP35247 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPDP35247 AC092337.1-201ENST00000568699 1129 ntBASIC14.16□□□□□ -0.14
SFTPDP35247 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.16□□□□□ -0.14
SFTPDP35247 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.16□□□□□ -0.14
SFTPDP35247 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.16□□□□□ -0.14
SFTPDP35247 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.16□□□□□ -0.14
SFTPDP35247 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPDP35247 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.16□□□□□ -0.14
SFTPDP35247 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SFTPDP35247 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPDP35247 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPDP35247 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPDP35247 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SFTPDP35247 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.16□□□□□ -0.14
SFTPDP35247 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPDP35247 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPDP35247 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPDP35247 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPDP35247 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPDP35247 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPDP35247 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPDP35247 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPDP35247 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPDP35247 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPDP35247 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SFTPDP35247 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SFTPDP35247 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SFTPDP35247 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SFTPDP35247 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.15□□□□□ -0.14
SFTPDP35247 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SFTPDP35247 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SFTPDP35247 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SFTPDP35247 AC105917.1-201ENST00000506637 2539 ntBASIC14.15□□□□□ -0.14
SFTPDP35247 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SFTPDP35247 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SFTPDP35247 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SFTPDP35247 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.15□□□□□ -0.14
SFTPDP35247 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SFTPDP35247 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SFTPDP35247 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SFTPDP35247 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SFTPDP35247 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SFTPDP35247 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SFTPDP35247 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SFTPDP35247 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SFTPDP35247 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SFTPDP35247 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SFTPDP35247 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.15□□□□□ -0.14
SFTPDP35247 SPTLC1P1-201ENST00000447199 261 ntBASIC14.15□□□□□ -0.14
SFTPDP35247 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.15□□□□□ -0.14
SFTPDP35247 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.15□□□□□ -0.14
SFTPDP35247 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SFTPDP35247 MEIS3P1-201ENST00000495167 958 ntBASIC14.15□□□□□ -0.14
SFTPDP35247 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SFTPDP35247 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.15□□□□□ -0.14
SFTPDP35247 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.15□□□□□ -0.14
SFTPDP35247 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.15□□□□□ -0.14
SFTPDP35247 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SFTPDP35247 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SFTPDP35247 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SFTPDP35247 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SFTPDP35247 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SFTPDP35247 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.15□□□□□ -0.14
SFTPDP35247 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SFTPDP35247 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SFTPDP35247 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.15□□□□□ -0.14
SFTPDP35247 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SFTPDP35247 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SFTPDP35247 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SFTPDP35247 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SFTPDP35247 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SFTPDP35247 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms