Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
MMP8P22894 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP8P22894 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP8P22894 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MMP8P22894 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.36■□□□□ 0.21
MMP8P22894 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
MMP8P22894 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP8P22894 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP8P22894 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP8P22894 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP8P22894 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.36■□□□□ 0.21
MMP8P22894 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.36■□□□□ 0.21
MMP8P22894 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.36■□□□□ 0.21
MMP8P22894 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MMP8P22894 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.36■□□□□ 0.21
MMP8P22894 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MMP8P22894 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.36■□□□□ 0.21
MMP8P22894 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP8P22894 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.36■□□□□ 0.21
MMP8P22894 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.36■□□□□ 0.21
MMP8P22894 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP8P22894 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
MMP8P22894 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP8P22894 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MMP8P22894 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP8P22894 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MMP8P22894 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP8P22894 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP8P22894 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP8P22894 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP8P22894 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP8P22894 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MMP8P22894 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP8P22894 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP8P22894 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP8P22894 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP8P22894 CLK3P2-201ENST00000427566 1453 ntBASIC16.35■□□□□ 0.21
MMP8P22894 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
MMP8P22894 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP8P22894 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MMP8P22894 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.35■□□□□ 0.21
MMP8P22894 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP8P22894 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
MMP8P22894 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP8P22894 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MMP8P22894 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.35■□□□□ 0.21
MMP8P22894 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MMP8P22894 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP8P22894 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.35■□□□□ 0.21
MMP8P22894 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
MMP8P22894 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
MMP8P22894 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP8P22894 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.35■□□□□ 0.21
MMP8P22894 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP8P22894 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.35■□□□□ 0.21
MMP8P22894 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.35■□□□□ 0.21
MMP8P22894 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.35■□□□□ 0.21
MMP8P22894 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.35■□□□□ 0.21
MMP8P22894 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP8P22894 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.35■□□□□ 0.21
MMP8P22894 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.35■□□□□ 0.21
MMP8P22894 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.35■□□□□ 0.21
MMP8P22894 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.35■□□□□ 0.21
MMP8P22894 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.35■□□□□ 0.21
MMP8P22894 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
MMP8P22894 LINC00528-201ENST00000600723 2160 ntBASIC16.35■□□□□ 0.21
MMP8P22894 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP8P22894 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP8P22894 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.35■□□□□ 0.21
MMP8P22894 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.35■□□□□ 0.21
MMP8P22894 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
MMP8P22894 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP8P22894 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.35■□□□□ 0.21
MMP8P22894 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.35■□□□□ 0.21
MMP8P22894 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP8P22894 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
MMP8P22894 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP8P22894 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
MMP8P22894 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP8P22894 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
MMP8P22894 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MMP8P22894 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP8P22894 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
MMP8P22894 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP8P22894 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.34■□□□□ 0.21
MMP8P22894 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP8P22894 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP8P22894 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MMP8P22894 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.34■□□□□ 0.21
MMP8P22894 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.34■□□□□ 0.21
MMP8P22894 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MMP8P22894 RARRES2P5-201ENST00000564013 466 ntBASIC16.34■□□□□ 0.21
MMP8P22894 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MMP8P22894 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.34■□□□□ 0.21
MMP8P22894 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
MMP8P22894 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.34■□□□□ 0.21
MMP8P22894 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP8P22894 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
MMP8P22894 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP8P22894 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms