Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 AC015656.1-201ENST00000624209 3578 ntBASIC14.53□□□□□ -0.08
TNFRSF1BP20333 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 AL359258.3-201ENST00000622910 2331 ntBASIC14.53□□□□□ -0.08
TNFRSF1BP20333 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 AC136604.1-201ENST00000418535 575 ntBASIC14.53□□□□□ -0.08
TNFRSF1BP20333 AL592309.1-201ENST00000443127 649 ntBASIC14.53□□□□□ -0.08
TNFRSF1BP20333 ALG1L5P-201ENST00000482043 771 ntBASIC14.53□□□□□ -0.08
TNFRSF1BP20333 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 AC026979.3-201ENST00000607315 403 ntBASIC14.53□□□□□ -0.08
TNFRSF1BP20333 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 AC005089.1-201ENST00000619486 2241 ntBASIC14.53□□□□□ -0.08
TNFRSF1BP20333 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFRSF1BP20333 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
TNFRSF1BP20333 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.52□□□□□ -0.08
TNFRSF1BP20333 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
TNFRSF1BP20333 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNFRSF1BP20333 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.52□□□□□ -0.08
TNFRSF1BP20333 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNFRSF1BP20333 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.52□□□□□ -0.08
TNFRSF1BP20333 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.52□□□□□ -0.08
TNFRSF1BP20333 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNFRSF1BP20333 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.52□□□□□ -0.08
TNFRSF1BP20333 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.52□□□□□ -0.08
TNFRSF1BP20333 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.52□□□□□ -0.08
TNFRSF1BP20333 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
TNFRSF1BP20333 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNFRSF1BP20333 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNFRSF1BP20333 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TNFRSF1BP20333 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.52□□□□□ -0.08
TNFRSF1BP20333 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TNFRSF1BP20333 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
TNFRSF1BP20333 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNFRSF1BP20333 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.52□□□□□ -0.08
TNFRSF1BP20333 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
TNFRSF1BP20333 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms