Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.28■□□□□ 0.36
TRIM21P19474 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM21P19474 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRIM21P19474 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.28■□□□□ 0.36
TRIM21P19474 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM21P19474 AC125807.1-201ENST00000483097 614 ntBASIC17.28■□□□□ 0.36
TRIM21P19474 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.28■□□□□ 0.36
TRIM21P19474 AC109322.1-201ENST00000524499 1264 ntBASIC17.28■□□□□ 0.36
TRIM21P19474 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.28■□□□□ 0.36
TRIM21P19474 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
TRIM21P19474 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
TRIM21P19474 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM21P19474 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM21P19474 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM21P19474 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM21P19474 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM21P19474 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
TRIM21P19474 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM21P19474 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TRIM21P19474 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRIM21P19474 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM21P19474 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRIM21P19474 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM21P19474 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM21P19474 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM21P19474 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRIM21P19474 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TRIM21P19474 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM21P19474 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM21P19474 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM21P19474 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM21P19474 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM21P19474 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM21P19474 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM21P19474 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM21P19474 AL136379.1-201ENST00000623471 2642 ntBASIC17.27■□□□□ 0.36
TRIM21P19474 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
TRIM21P19474 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM21P19474 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM21P19474 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM21P19474 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM21P19474 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM21P19474 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM21P19474 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TRIM21P19474 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM21P19474 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.27■□□□□ 0.36
TRIM21P19474 KLF2P3-201ENST00000451977 1087 ntBASIC17.27■□□□□ 0.36
TRIM21P19474 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.27■□□□□ 0.36
TRIM21P19474 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM21P19474 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM21P19474 AC093028.1-201ENST00000622998 982 ntBASIC17.27■□□□□ 0.36
TRIM21P19474 Z92544.3-201ENST00000624747 417 ntBASIC17.27■□□□□ 0.36
TRIM21P19474 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM21P19474 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM21P19474 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.27■□□□□ 0.35
TRIM21P19474 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.27■□□□□ 0.35
TRIM21P19474 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM21P19474 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.27■□□□□ 0.35
TRIM21P19474 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM21P19474 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.27■□□□□ 0.35
TRIM21P19474 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TRIM21P19474 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.27■□□□□ 0.35
TRIM21P19474 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.27■□□□□ 0.35
TRIM21P19474 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.27■□□□□ 0.35
TRIM21P19474 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TRIM21P19474 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM21P19474 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM21P19474 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TRIM21P19474 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM21P19474 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM21P19474 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM21P19474 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM21P19474 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM21P19474 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
TRIM21P19474 OR2I1P-210ENST00000642037 4691 ntBASIC17.26■□□□□ 0.35
TRIM21P19474 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM21P19474 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM21P19474 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM21P19474 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRIM21P19474 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM21P19474 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM21P19474 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM21P19474 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM21P19474 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM21P19474 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRIM21P19474 AC107890.1-201ENST00000422478 521 ntBASIC17.26■□□□□ 0.35
TRIM21P19474 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM21P19474 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM21P19474 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM21P19474 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM21P19474 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.26■□□□□ 0.35
TRIM21P19474 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM21P19474 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM21P19474 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM21P19474 AL450472.2-201ENST00000603663 1156 ntBASIC17.26■□□□□ 0.35
TRIM21P19474 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM21P19474 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM21P19474 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM21P19474 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM21P19474 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms