Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
XRCC1P18887 HAUS4P1-201ENST00000406739 1145 ntBASIC15.6■□□□□ 0.09
XRCC1P18887 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.6■□□□□ 0.09
XRCC1P18887 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.6■□□□□ 0.09
XRCC1P18887 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.6■□□□□ 0.09
XRCC1P18887 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.6■□□□□ 0.09
XRCC1P18887 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
XRCC1P18887 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
XRCC1P18887 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
XRCC1P18887 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.6■□□□□ 0.09
XRCC1P18887 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
XRCC1P18887 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
XRCC1P18887 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
XRCC1P18887 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
XRCC1P18887 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
XRCC1P18887 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.6■□□□□ 0.09
XRCC1P18887 AC063926.3-201ENST00000624734 5658 ntBASIC15.6■□□□□ 0.09
XRCC1P18887 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.6■□□□□ 0.09
XRCC1P18887 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.6■□□□□ 0.09
XRCC1P18887 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.6■□□□□ 0.09
XRCC1P18887 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
XRCC1P18887 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
XRCC1P18887 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
XRCC1P18887 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
XRCC1P18887 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
XRCC1P18887 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
XRCC1P18887 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
XRCC1P18887 TCAF2P1-201ENST00000291129 2421 ntBASIC15.59■□□□□ 0.09
XRCC1P18887 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.59■□□□□ 0.09
XRCC1P18887 AP001282.1-201ENST00000531301 1499 ntBASIC15.59■□□□□ 0.09
XRCC1P18887 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC1P18887 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
XRCC1P18887 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC1P18887 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC1P18887 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.59■□□□□ 0.09
XRCC1P18887 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
XRCC1P18887 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC1P18887 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC1P18887 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC1P18887 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.59■□□□□ 0.09
XRCC1P18887 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.59■□□□□ 0.09
XRCC1P18887 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.59■□□□□ 0.09
XRCC1P18887 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.59■□□□□ 0.09
XRCC1P18887 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
XRCC1P18887 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC1P18887 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC1P18887 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC1P18887 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
XRCC1P18887 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC1P18887 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.59■□□□□ 0.09
XRCC1P18887 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.59■□□□□ 0.09
XRCC1P18887 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.59■□□□□ 0.09
XRCC1P18887 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC1P18887 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.59■□□□□ 0.09
XRCC1P18887 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.59■□□□□ 0.09
XRCC1P18887 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
XRCC1P18887 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.59■□□□□ 0.09
XRCC1P18887 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
XRCC1P18887 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.59■□□□□ 0.09
XRCC1P18887 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.59■□□□□ 0.09
XRCC1P18887 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.59■□□□□ 0.09
XRCC1P18887 AC004233.3-201ENST00000607794 1269 ntBASIC15.59■□□□□ 0.09
XRCC1P18887 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.59■□□□□ 0.09
XRCC1P18887 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.59■□□□□ 0.09
XRCC1P18887 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC1P18887 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.59■□□□□ 0.09
XRCC1P18887 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.59■□□□□ 0.09
XRCC1P18887 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.59■□□□□ 0.09
XRCC1P18887 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC1P18887 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC1P18887 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC1P18887 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.59■□□□□ 0.09
XRCC1P18887 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.59■□□□□ 0.09
XRCC1P18887 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC1P18887 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC1P18887 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC1P18887 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC1P18887 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC1P18887 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.59■□□□□ 0.09
XRCC1P18887 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC1P18887 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
XRCC1P18887 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC1P18887 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC1P18887 KRT8P37-201ENST00000451609 1420 ntBASIC15.59■□□□□ 0.09
XRCC1P18887 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
XRCC1P18887 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC1P18887 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.59■□□□□ 0.09
XRCC1P18887 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
XRCC1P18887 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
XRCC1P18887 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
XRCC1P18887 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
XRCC1P18887 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.58■□□□□ 0.09
XRCC1P18887 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
XRCC1P18887 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
XRCC1P18887 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
XRCC1P18887 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
XRCC1P18887 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
XRCC1P18887 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
XRCC1P18887 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.58■□□□□ 0.09
XRCC1P18887 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms