Protein–RNA interactions for Protein: P17538

CTRB1, Chymotrypsinogen B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTRB1P17538 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTRB1P17538 PMS2P1-201ENST00000431037 1228 ntBASIC13.21□□□□□ -0.29
CTRB1P17538 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTRB1P17538 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.21□□□□□ -0.29
CTRB1P17538 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.21□□□□□ -0.29
CTRB1P17538 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.21□□□□□ -0.29
CTRB1P17538 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.21□□□□□ -0.29
CTRB1P17538 AL031008.1-201ENST00000619963 541 ntBASIC13.21□□□□□ -0.29
CTRB1P17538 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.21□□□□□ -0.29
CTRB1P17538 FAM215A-202ENST00000632077 792 ntBASIC13.21□□□□□ -0.29
CTRB1P17538 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
CTRB1P17538 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTRB1P17538 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.21□□□□□ -0.29
CTRB1P17538 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTRB1P17538 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTRB1P17538 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTRB1P17538 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CTRB1P17538 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CTRB1P17538 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.21□□□□□ -0.3
CTRB1P17538 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
CTRB1P17538 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CTRB1P17538 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CTRB1P17538 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.21□□□□□ -0.3
CTRB1P17538 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CTRB1P17538 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.21□□□□□ -0.3
CTRB1P17538 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CTRB1P17538 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CTRB1P17538 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CTRB1P17538 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CTRB1P17538 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
CTRB1P17538 AC136621.1-201ENST00000624017 2304 ntBASIC13.21□□□□□ -0.3
CTRB1P17538 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTRB1P17538 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.2□□□□□ -0.3
CTRB1P17538 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.2□□□□□ -0.3
CTRB1P17538 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.2□□□□□ -0.3
CTRB1P17538 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CTRB1P17538 ME2P1-201ENST00000426028 1970 ntBASIC13.2□□□□□ -0.3
CTRB1P17538 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CTRB1P17538 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTRB1P17538 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTRB1P17538 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.2□□□□□ -0.3
CTRB1P17538 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CTRB1P17538 AL359881.3-201ENST00000602640 1721 ntBASIC13.2□□□□□ -0.3
CTRB1P17538 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTRB1P17538 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTRB1P17538 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.2□□□□□ -0.3
CTRB1P17538 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTRB1P17538 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTRB1P17538 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.2□□□□□ -0.3
CTRB1P17538 MRPL20P1-201ENST00000400819 433 ntBASIC13.2□□□□□ -0.3
CTRB1P17538 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CTRB1P17538 HCG4-201ENST00000418983 998 ntBASIC13.2□□□□□ -0.3
CTRB1P17538 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.2□□□□□ -0.3
CTRB1P17538 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.2□□□□□ -0.3
CTRB1P17538 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.2□□□□□ -0.3
CTRB1P17538 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.2□□□□□ -0.3
CTRB1P17538 AC087641.1-201ENST00000557561 1021 ntBASIC13.2□□□□□ -0.3
CTRB1P17538 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.2□□□□□ -0.3
CTRB1P17538 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.2□□□□□ -0.3
CTRB1P17538 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.2□□□□□ -0.3
CTRB1P17538 CYP2A7P1-201ENST00000595391 815 ntBASIC13.2□□□□□ -0.3
CTRB1P17538 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CTRB1P17538 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTRB1P17538 AL773604.1-201ENST00000617417 272 ntBASIC13.2□□□□□ -0.3
CTRB1P17538 AC148477.8-201ENST00000624298 468 ntBASIC13.2□□□□□ -0.3
CTRB1P17538 AP001350.2-201ENST00000625104 1094 ntBASIC13.2□□□□□ -0.3
CTRB1P17538 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.2□□□□□ -0.3
CTRB1P17538 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CTRB1P17538 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTRB1P17538 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTRB1P17538 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.2□□□□□ -0.3
CTRB1P17538 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CTRB1P17538 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.2□□□□□ -0.3
CTRB1P17538 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTRB1P17538 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CTRB1P17538 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTRB1P17538 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTRB1P17538 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTRB1P17538 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.2□□□□□ -0.3
CTRB1P17538 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
CTRB1P17538 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.2□□□□□ -0.3
CTRB1P17538 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTRB1P17538 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTRB1P17538 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.19□□□□□ -0.3
CTRB1P17538 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTRB1P17538 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTRB1P17538 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTRB1P17538 AL512652.2-201ENST00000625156 1716 ntBASIC13.19□□□□□ -0.3
CTRB1P17538 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTRB1P17538 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTRB1P17538 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTRB1P17538 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
CTRB1P17538 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.19□□□□□ -0.3
CTRB1P17538 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CTRB1P17538 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTRB1P17538 GGT3P-204ENST00000453783 1664 ntBASIC13.19□□□□□ -0.3
CTRB1P17538 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CTRB1P17538 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.19□□□□□ -0.3
CTRB1P17538 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTRB1P17538 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms