Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 MVK-214ENST00000629016 1591 ntTSL 5 BASIC26.56■■□□□ 1.84
TOP2AP11388 AC006058.4-201ENST00000624016 1670 ntBASIC26.56■■□□□ 1.84
TOP2AP11388 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
TOP2AP11388 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
TOP2AP11388 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TOP2AP11388 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC26.55■■□□□ 1.84
TOP2AP11388 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
TOP2AP11388 HNRNPA1P41-201ENST00000397777 928 ntBASIC26.55■■□□□ 1.84
TOP2AP11388 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC26.55■■□□□ 1.84
TOP2AP11388 STUB1-204ENST00000564370 875 ntTSL 2 BASIC26.55■■□□□ 1.84
TOP2AP11388 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC26.55■■□□□ 1.84
TOP2AP11388 AC012044.1-201ENST00000603431 297 ntBASIC26.55■■□□□ 1.84
TOP2AP11388 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC26.55■■□□□ 1.84
TOP2AP11388 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
TOP2AP11388 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TOP2AP11388 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
TOP2AP11388 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TOP2AP11388 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
TOP2AP11388 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC26.55■■□□□ 1.84
TOP2AP11388 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TOP2AP11388 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TOP2AP11388 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TOP2AP11388 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TOP2AP11388 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TOP2AP11388 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
TOP2AP11388 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TOP2AP11388 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TOP2AP11388 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TOP2AP11388 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC26.55■■□□□ 1.84
TOP2AP11388 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC26.55■■□□□ 1.84
TOP2AP11388 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC26.55■■□□□ 1.84
TOP2AP11388 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC26.54■■□□□ 1.84
TOP2AP11388 AC020910.5-201ENST00000623668 1865 ntBASIC26.54■■□□□ 1.84
TOP2AP11388 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TOP2AP11388 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
TOP2AP11388 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TOP2AP11388 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TOP2AP11388 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TOP2AP11388 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TOP2AP11388 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TOP2AP11388 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TOP2AP11388 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC26.54■■□□□ 1.84
TOP2AP11388 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC26.54■■□□□ 1.84
TOP2AP11388 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC26.54■■□□□ 1.84
TOP2AP11388 AMT-239ENST00000636865 1914 ntTSL 5 BASIC26.54■■□□□ 1.84
TOP2AP11388 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC26.53■■□□□ 1.84
TOP2AP11388 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
TOP2AP11388 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TOP2AP11388 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
TOP2AP11388 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC26.53■■□□□ 1.84
TOP2AP11388 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
TOP2AP11388 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
TOP2AP11388 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC26.53■■□□□ 1.84
TOP2AP11388 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC26.53■■□□□ 1.84
TOP2AP11388 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
TOP2AP11388 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC26.53■■□□□ 1.84
TOP2AP11388 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC26.53■■□□□ 1.84
TOP2AP11388 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TOP2AP11388 AC073352.2-201ENST00000609385 439 ntBASIC26.53■■□□□ 1.84
TOP2AP11388 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TOP2AP11388 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC26.53■■□□□ 1.84
TOP2AP11388 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TOP2AP11388 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TOP2AP11388 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
TOP2AP11388 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TOP2AP11388 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC26.52■■□□□ 1.84
TOP2AP11388 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
TOP2AP11388 AC105250.1-201ENST00000509378 2057 ntBASIC26.52■■□□□ 1.84
TOP2AP11388 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TOP2AP11388 AC003102.2-201ENST00000589195 1469 ntBASIC26.52■■□□□ 1.84
TOP2AP11388 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
TOP2AP11388 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
TOP2AP11388 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC26.52■■□□□ 1.84
TOP2AP11388 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
TOP2AP11388 AL645933.1-201ENST00000440087 609 ntBASIC26.52■■□□□ 1.84
TOP2AP11388 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC26.52■■□□□ 1.84
TOP2AP11388 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC26.52■■□□□ 1.84
TOP2AP11388 MBP-227ENST00000526111 581 ntTSL 4 BASIC26.52■■□□□ 1.84
TOP2AP11388 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
TOP2AP11388 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
TOP2AP11388 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
TOP2AP11388 MIR7845-201ENST00000618396 99 ntBASIC26.52■■□□□ 1.84
TOP2AP11388 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC26.52■■□□□ 1.84
TOP2AP11388 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
TOP2AP11388 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TOP2AP11388 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TOP2AP11388 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TOP2AP11388 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC26.52■■□□□ 1.84
TOP2AP11388 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC26.52■■□□□ 1.84
TOP2AP11388 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
TOP2AP11388 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC26.52■■□□□ 1.84
TOP2AP11388 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
TOP2AP11388 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
TOP2AP11388 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
TOP2AP11388 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC26.51■■□□□ 1.83
TOP2AP11388 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC26.51■■□□□ 1.83
TOP2AP11388 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TOP2AP11388 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
TOP2AP11388 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
TOP2AP11388 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms