Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13□□□□□ -0.33
CTSDP07339 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CTSDP07339 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13□□□□□ -0.33
CTSDP07339 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13□□□□□ -0.33
CTSDP07339 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13□□□□□ -0.33
CTSDP07339 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13□□□□□ -0.33
CTSDP07339 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CTSDP07339 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CTSDP07339 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CTSDP07339 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13□□□□□ -0.33
CTSDP07339 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CTSDP07339 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13□□□□□ -0.33
CTSDP07339 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13□□□□□ -0.33
CTSDP07339 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13□□□□□ -0.33
CTSDP07339 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13□□□□□ -0.33
CTSDP07339 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13□□□□□ -0.33
CTSDP07339 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13□□□□□ -0.33
CTSDP07339 AC097359.3-201ENST00000603982 1210 ntBASIC13□□□□□ -0.33
CTSDP07339 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13□□□□□ -0.33
CTSDP07339 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13□□□□□ -0.33
CTSDP07339 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CTSDP07339 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13□□□□□ -0.33
CTSDP07339 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CTSDP07339 AC041040.2-201ENST00000622926 2899 ntBASIC13□□□□□ -0.33
CTSDP07339 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13□□□□□ -0.33
CTSDP07339 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CTSDP07339 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13□□□□□ -0.33
CTSDP07339 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13□□□□□ -0.33
CTSDP07339 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CTSDP07339 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13□□□□□ -0.33
CTSDP07339 REXO1L2P-201ENST00000425429 2069 ntBASIC13□□□□□ -0.33
CTSDP07339 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CTSDP07339 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13□□□□□ -0.33
CTSDP07339 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CTSDP07339 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13□□□□□ -0.33
CTSDP07339 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CTSDP07339 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13□□□□□ -0.33
CTSDP07339 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CTSDP07339 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.99□□□□□ -0.33
CTSDP07339 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CTSDP07339 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.99□□□□□ -0.33
CTSDP07339 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.99□□□□□ -0.33
CTSDP07339 AL136982.4-201ENST00000437689 1740 ntBASIC12.99□□□□□ -0.33
CTSDP07339 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CTSDP07339 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CTSDP07339 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CTSDP07339 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CTSDP07339 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CTSDP07339 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.99□□□□□ -0.33
CTSDP07339 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CTSDP07339 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
CTSDP07339 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CTSDP07339 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CTSDP07339 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CTSDP07339 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CTSDP07339 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CTSDP07339 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.99□□□□□ -0.33
CTSDP07339 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CTSDP07339 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC12.99□□□□□ -0.33
CTSDP07339 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CTSDP07339 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CTSDP07339 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CTSDP07339 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.99□□□□□ -0.33
CTSDP07339 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.99□□□□□ -0.33
CTSDP07339 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.99□□□□□ -0.33
CTSDP07339 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CTSDP07339 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CTSDP07339 KRT18P67-201ENST00000432816 1264 ntBASIC12.99□□□□□ -0.33
CTSDP07339 AC092910.1-201ENST00000482027 1129 ntBASIC12.99□□□□□ -0.33
CTSDP07339 AC105233.2-201ENST00000523697 349 ntBASIC12.99□□□□□ -0.33
CTSDP07339 UNC93B6-202ENST00000528242 690 ntBASIC12.99□□□□□ -0.33
CTSDP07339 AF228730.5-201ENST00000530288 346 ntBASIC12.99□□□□□ -0.33
CTSDP07339 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.99□□□□□ -0.33
CTSDP07339 HNRNPUP1-201ENST00000554987 333 ntBASIC12.99□□□□□ -0.33
CTSDP07339 CBFB-203ENST00000561924 584 ntTSL 5 BASIC12.99□□□□□ -0.33
CTSDP07339 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.99□□□□□ -0.33
CTSDP07339 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC12.99□□□□□ -0.33
CTSDP07339 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.99□□□□□ -0.33
CTSDP07339 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CTSDP07339 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.99□□□□□ -0.33
CTSDP07339 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.99□□□□□ -0.33
CTSDP07339 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CTSDP07339 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CTSDP07339 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
CTSDP07339 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CTSDP07339 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CTSDP07339 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CTSDP07339 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
CTSDP07339 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CTSDP07339 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CTSDP07339 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CTSDP07339 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
CTSDP07339 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CTSDP07339 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CTSDP07339 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CTSDP07339 INTS4P1-203ENST00000641008 3683 ntBASIC12.99□□□□□ -0.33
CTSDP07339 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.99□□□□□ -0.33
CTSDP07339 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CTSDP07339 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSDP07339 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms