Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL5A2P05997 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
COL5A2P05997 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL5A2P05997 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL5A2P05997 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL5A2P05997 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL5A2P05997 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC20.02■□□□□ 0.8
COL5A2P05997 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL5A2P05997 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL5A2P05997 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC20.02■□□□□ 0.8
COL5A2P05997 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL5A2P05997 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.02■□□□□ 0.8
COL5A2P05997 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL5A2P05997 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL5A2P05997 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL5A2P05997 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL5A2P05997 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC20.02■□□□□ 0.8
COL5A2P05997 OR2K2-202ENST00000374428 1038 ntBASIC20.02■□□□□ 0.8
COL5A2P05997 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL5A2P05997 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC20.02■□□□□ 0.8
COL5A2P05997 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC20.02■□□□□ 0.8
COL5A2P05997 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC20.02■□□□□ 0.8
COL5A2P05997 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC20.02■□□□□ 0.8
COL5A2P05997 NAT9-211ENST00000580632 799 ntTSL 3 BASIC20.02■□□□□ 0.8
COL5A2P05997 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC20.02■□□□□ 0.8
COL5A2P05997 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC20.02■□□□□ 0.8
COL5A2P05997 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL5A2P05997 AC112504.1-201ENST00000623415 1841 ntBASIC20.02■□□□□ 0.8
COL5A2P05997 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL5A2P05997 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
COL5A2P05997 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.02■□□□□ 0.8
COL5A2P05997 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.02■□□□□ 0.79
COL5A2P05997 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL5A2P05997 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.79
COL5A2P05997 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL5A2P05997 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
COL5A2P05997 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL5A2P05997 TNRC18P3-201ENST00000441896 2691 ntBASIC20.02■□□□□ 0.79
COL5A2P05997 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL5A2P05997 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL5A2P05997 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
COL5A2P05997 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
COL5A2P05997 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL5A2P05997 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL5A2P05997 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL5A2P05997 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL5A2P05997 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL5A2P05997 RPL5P21-201ENST00000404620 815 ntBASIC20.01■□□□□ 0.79
COL5A2P05997 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC20.01■□□□□ 0.79
COL5A2P05997 DNAJB1P1-201ENST00000429417 1024 ntBASIC20.01■□□□□ 0.79
COL5A2P05997 AC078875.1-201ENST00000431907 724 ntBASIC20.01■□□□□ 0.79
COL5A2P05997 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC20.01■□□□□ 0.79
COL5A2P05997 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL5A2P05997 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
COL5A2P05997 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC20.01■□□□□ 0.79
COL5A2P05997 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC20.01■□□□□ 0.79
COL5A2P05997 AC242376.2-201ENST00000619355 883 ntBASIC20.01■□□□□ 0.79
COL5A2P05997 RPL35-206ENST00000629845 340 ntTSL 5 BASIC20.01■□□□□ 0.79
COL5A2P05997 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
COL5A2P05997 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL5A2P05997 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL5A2P05997 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
COL5A2P05997 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
COL5A2P05997 AMT-239ENST00000636865 1914 ntTSL 5 BASIC20.01■□□□□ 0.79
COL5A2P05997 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL5A2P05997 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL5A2P05997 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
COL5A2P05997 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC20.01■□□□□ 0.79
COL5A2P05997 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL5A2P05997 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL5A2P05997 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
COL5A2P05997 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
COL5A2P05997 AC005332.8-201ENST00000622750 2735 ntBASIC20■□□□□ 0.79
COL5A2P05997 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
COL5A2P05997 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC20■□□□□ 0.79
COL5A2P05997 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL5A2P05997 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL5A2P05997 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL5A2P05997 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC20■□□□□ 0.79
COL5A2P05997 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL5A2P05997 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL5A2P05997 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL5A2P05997 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL5A2P05997 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL5A2P05997 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC20■□□□□ 0.79
COL5A2P05997 RN7SL67P-201ENST00000492147 296 ntBASIC20■□□□□ 0.79
COL5A2P05997 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
COL5A2P05997 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC20■□□□□ 0.79
COL5A2P05997 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
COL5A2P05997 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC20■□□□□ 0.79
COL5A2P05997 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC20■□□□□ 0.79
COL5A2P05997 AC008805.1-201ENST00000590892 364 ntBASIC20■□□□□ 0.79
COL5A2P05997 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
COL5A2P05997 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC20■□□□□ 0.79
COL5A2P05997 MIR6756-201ENST00000616240 63 ntBASIC20■□□□□ 0.79
COL5A2P05997 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL5A2P05997 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
COL5A2P05997 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20■□□□□ 0.79
COL5A2P05997 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20■□□□□ 0.79
COL5A2P05997 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms