Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD74P04233 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD74P04233 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.14□□□□□ -0.31
CD74P04233 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD74P04233 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.14□□□□□ -0.31
CD74P04233 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD74P04233 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.14□□□□□ -0.31
CD74P04233 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD74P04233 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.14□□□□□ -0.31
CD74P04233 AC136604.1-201ENST00000418535 575 ntBASIC13.14□□□□□ -0.31
CD74P04233 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.14□□□□□ -0.31
CD74P04233 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.14□□□□□ -0.31
CD74P04233 RHOQP3-201ENST00000437982 621 ntBASIC13.14□□□□□ -0.31
CD74P04233 VN2R19P-201ENST00000442399 1052 ntBASIC13.14□□□□□ -0.31
CD74P04233 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.14□□□□□ -0.31
CD74P04233 AC096734.2-201ENST00000562054 433 ntBASIC13.14□□□□□ -0.31
CD74P04233 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.14□□□□□ -0.31
CD74P04233 MIR3652-201ENST00000579335 131 ntBASIC13.14□□□□□ -0.31
CD74P04233 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.14□□□□□ -0.31
CD74P04233 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD74P04233 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD74P04233 TP73-AS1-207ENST00000624167 988 ntBASIC13.14□□□□□ -0.31
CD74P04233 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.14□□□□□ -0.31
CD74P04233 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD74P04233 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD74P04233 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CD74P04233 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD74P04233 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD74P04233 CYP4F24P-201ENST00000586049 1580 ntBASIC13.14□□□□□ -0.31
CD74P04233 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.14□□□□□ -0.31
CD74P04233 AC107918.4-201ENST00000641966 3141 ntBASIC13.14□□□□□ -0.31
CD74P04233 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.14□□□□□ -0.31
CD74P04233 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD74P04233 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD74P04233 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD74P04233 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CD74P04233 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.13□□□□□ -0.31
CD74P04233 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CD74P04233 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CD74P04233 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CD74P04233 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.13□□□□□ -0.31
CD74P04233 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CD74P04233 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.13□□□□□ -0.31
CD74P04233 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.13□□□□□ -0.31
CD74P04233 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.13□□□□□ -0.31
CD74P04233 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CD74P04233 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.13□□□□□ -0.31
CD74P04233 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.13□□□□□ -0.31
CD74P04233 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.13□□□□□ -0.31
CD74P04233 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.13□□□□□ -0.31
CD74P04233 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.13□□□□□ -0.31
CD74P04233 AC108751.1-201ENST00000490852 363 ntBASIC13.13□□□□□ -0.31
CD74P04233 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.13□□□□□ -0.31
CD74P04233 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.13□□□□□ -0.31
CD74P04233 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 AC117500.6-201ENST00000624871 588 ntBASIC13.13□□□□□ -0.31
CD74P04233 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CD74P04233 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.13□□□□□ -0.31
CD74P04233 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CD74P04233 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
CD74P04233 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 AC018529.2-202ENST00000611482 3087 ntBASIC13.13□□□□□ -0.31
CD74P04233 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.13□□□□□ -0.31
CD74P04233 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.13□□□□□ -0.31
CD74P04233 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.13□□□□□ -0.31
CD74P04233 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CD74P04233 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CD74P04233 FOXO1B-201ENST00000504678 1527 ntBASIC13.13□□□□□ -0.31
CD74P04233 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.13□□□□□ -0.31
CD74P04233 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.13□□□□□ -0.31
CD74P04233 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CD74P04233 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.13□□□□□ -0.31
CD74P04233 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CD74P04233 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD74P04233 AC018442.1-201ENST00000421439 2061 ntBASIC13.12□□□□□ -0.31
CD74P04233 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms