Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 MIR4313-201ENST00000580760 101 ntBASIC15.98■□□□□ 0.15
MT-ND3P03897 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.98■□□□□ 0.15
MT-ND3P03897 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.98■□□□□ 0.15
MT-ND3P03897 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.98■□□□□ 0.15
MT-ND3P03897 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND3P03897 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND3P03897 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND3P03897 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND3P03897 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
MT-ND3P03897 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
MT-ND3P03897 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
MT-ND3P03897 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.98■□□□□ 0.15
MT-ND3P03897 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
MT-ND3P03897 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
MT-ND3P03897 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
MT-ND3P03897 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND3P03897 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND3P03897 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND3P03897 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND3P03897 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.98■□□□□ 0.15
MT-ND3P03897 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND3P03897 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND3P03897 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND3P03897 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND3P03897 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND3P03897 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
MT-ND3P03897 AC013726.1-201ENST00000563747 2285 ntBASIC15.97■□□□□ 0.15
MT-ND3P03897 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND3P03897 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
MT-ND3P03897 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.97■□□□□ 0.15
MT-ND3P03897 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
MT-ND3P03897 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND3P03897 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.97■□□□□ 0.15
MT-ND3P03897 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
MT-ND3P03897 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND3P03897 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.97■□□□□ 0.15
MT-ND3P03897 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.97■□□□□ 0.15
MT-ND3P03897 AL135744.1-201ENST00000565098 629 ntBASIC15.97■□□□□ 0.15
MT-ND3P03897 AC015911.4-201ENST00000588022 1070 ntBASIC15.97■□□□□ 0.15
MT-ND3P03897 LINC02084-201ENST00000606069 1096 ntBASIC15.97■□□□□ 0.15
MT-ND3P03897 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND3P03897 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.97■□□□□ 0.15
MT-ND3P03897 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND3P03897 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
MT-ND3P03897 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND3P03897 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND3P03897 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
MT-ND3P03897 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND3P03897 AC007686.3-201ENST00000619017 3487 ntBASIC15.97■□□□□ 0.15
MT-ND3P03897 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND3P03897 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
MT-ND3P03897 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
MT-ND3P03897 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND3P03897 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND3P03897 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND3P03897 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
MT-ND3P03897 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND3P03897 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND3P03897 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND3P03897 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND3P03897 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.97■□□□□ 0.15
MT-ND3P03897 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.97■□□□□ 0.15
MT-ND3P03897 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND3P03897 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND3P03897 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
MT-ND3P03897 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND3P03897 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND3P03897 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.96■□□□□ 0.15
MT-ND3P03897 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
MT-ND3P03897 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.96■□□□□ 0.15
MT-ND3P03897 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND3P03897 AL691432.1-201ENST00000596308 1422 ntBASIC15.96■□□□□ 0.15
MT-ND3P03897 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.96■□□□□ 0.15
MT-ND3P03897 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND3P03897 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND3P03897 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND3P03897 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND3P03897 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND3P03897 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND3P03897 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND3P03897 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.96■□□□□ 0.15
MT-ND3P03897 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.96■□□□□ 0.15
MT-ND3P03897 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND3P03897 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.96■□□□□ 0.15
MT-ND3P03897 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.96■□□□□ 0.15
MT-ND3P03897 AC079140.1-201ENST00000508039 487 ntBASIC15.96■□□□□ 0.15
MT-ND3P03897 KRT8P48-201ENST00000515599 1220 ntBASIC15.96■□□□□ 0.15
MT-ND3P03897 IGHV3-62-201ENST00000520057 340 ntBASIC15.96■□□□□ 0.15
MT-ND3P03897 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
MT-ND3P03897 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.96■□□□□ 0.15
MT-ND3P03897 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.96■□□□□ 0.15
MT-ND3P03897 KRT8P23-201ENST00000560090 1207 ntBASIC15.96■□□□□ 0.15
MT-ND3P03897 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.96■□□□□ 0.15
MT-ND3P03897 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.96■□□□□ 0.15
MT-ND3P03897 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.96■□□□□ 0.15
MT-ND3P03897 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.96■□□□□ 0.15
MT-ND3P03897 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND3P03897 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.96■□□□□ 0.15
MT-ND3P03897 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
MT-ND3P03897 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms