Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC018735.1-201ENST00000437208 1502 ntBASIC18.48■□□□□ 0.55
COL1A1P02452 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.48■□□□□ 0.55
COL1A1P02452 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.48■□□□□ 0.55
COL1A1P02452 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL1A1P02452 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL1A1P02452 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL1A1P02452 AC055811.4-201ENST00000624039 1754 ntBASIC18.48■□□□□ 0.55
COL1A1P02452 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL1A1P02452 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL1A1P02452 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL1A1P02452 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
COL1A1P02452 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC18.47■□□□□ 0.55
COL1A1P02452 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC18.47■□□□□ 0.55
COL1A1P02452 HOMER2P2-201ENST00000451621 847 ntBASIC18.47■□□□□ 0.55
COL1A1P02452 AKR7A2P1-201ENST00000460134 915 ntBASIC18.47■□□□□ 0.55
COL1A1P02452 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC18.47■□□□□ 0.55
COL1A1P02452 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL1A1P02452 ACTG1P17-201ENST00000558391 1119 ntBASIC18.47■□□□□ 0.55
COL1A1P02452 CYGB-203ENST00000589145 788 ntTSL 3 BASIC18.47■□□□□ 0.55
COL1A1P02452 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC18.47■□□□□ 0.55
COL1A1P02452 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.47■□□□□ 0.55
COL1A1P02452 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL1A1P02452 AC015818.8-201ENST00000587907 1519 ntBASIC18.47■□□□□ 0.55
COL1A1P02452 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
COL1A1P02452 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL1A1P02452 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL1A1P02452 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL1A1P02452 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL1A1P02452 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL1A1P02452 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
COL1A1P02452 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC18.47■□□□□ 0.55
COL1A1P02452 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC18.47■□□□□ 0.55
COL1A1P02452 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.47■□□□□ 0.55
COL1A1P02452 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.47■□□□□ 0.55
COL1A1P02452 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
COL1A1P02452 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL1A1P02452 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
COL1A1P02452 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL1A1P02452 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL1A1P02452 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
COL1A1P02452 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL1A1P02452 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL1A1P02452 AL023775.1-201ENST00000454907 1746 ntBASIC18.46■□□□□ 0.55
COL1A1P02452 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL1A1P02452 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
COL1A1P02452 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC18.46■□□□□ 0.55
COL1A1P02452 BX284668.4-201ENST00000453917 508 ntBASIC18.46■□□□□ 0.55
COL1A1P02452 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL1A1P02452 AL391280.1-201ENST00000506969 1062 ntBASIC18.46■□□□□ 0.55
COL1A1P02452 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
COL1A1P02452 AL096828.3-201ENST00000615354 462 ntBASIC18.46■□□□□ 0.55
COL1A1P02452 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL1A1P02452 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL1A1P02452 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL1A1P02452 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL1A1P02452 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
COL1A1P02452 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL1A1P02452 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.46■□□□□ 0.55
COL1A1P02452 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL1A1P02452 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL1A1P02452 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL1A1P02452 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL1A1P02452 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL1A1P02452 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
COL1A1P02452 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL1A1P02452 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.46■□□□□ 0.55
COL1A1P02452 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL1A1P02452 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL1A1P02452 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL1A1P02452 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
COL1A1P02452 SNX21-203ENST00000372541 771 ntTSL 2 BASIC18.46■□□□□ 0.54
COL1A1P02452 MIR663B-201ENST00000408361 115 ntBASIC18.46■□□□□ 0.54
COL1A1P02452 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC18.46■□□□□ 0.54
COL1A1P02452 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC18.46■□□□□ 0.54
COL1A1P02452 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC18.46■□□□□ 0.54
COL1A1P02452 AC015967.2-201ENST00000624092 234 ntBASIC18.46■□□□□ 0.54
COL1A1P02452 AC006435.4-201ENST00000625037 234 ntBASIC18.46■□□□□ 0.54
COL1A1P02452 AL356737.1-201ENST00000634391 234 ntBASIC18.46■□□□□ 0.54
COL1A1P02452 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL1A1P02452 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
COL1A1P02452 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.45■□□□□ 0.54
COL1A1P02452 AC112693.3-201ENST00000624819 1983 ntBASIC18.45■□□□□ 0.54
COL1A1P02452 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
COL1A1P02452 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL1A1P02452 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL1A1P02452 AC020658.6-201ENST00000623564 1870 ntBASIC18.45■□□□□ 0.54
COL1A1P02452 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
COL1A1P02452 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.45■□□□□ 0.54
COL1A1P02452 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.45■□□□□ 0.54
COL1A1P02452 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
COL1A1P02452 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL1A1P02452 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.45■□□□□ 0.54
COL1A1P02452 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL1A1P02452 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL1A1P02452 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC18.45■□□□□ 0.54
COL1A1P02452 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC18.45■□□□□ 0.54
COL1A1P02452 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC18.45■□□□□ 0.54
COL1A1P02452 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.45■□□□□ 0.54
COL1A1P02452 HSPB1P2-201ENST00000448722 546 ntBASIC18.45■□□□□ 0.54
COL1A1P02452 NEU3-202ENST00000526068 431 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms