Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.38■□□□□ 0.37
CLSTN1O94985 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CLSTN1O94985 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLSTN1O94985 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLSTN1O94985 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLSTN1O94985 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLSTN1O94985 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.38■□□□□ 0.37
CLSTN1O94985 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
CLSTN1O94985 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC17.38■□□□□ 0.37
CLSTN1O94985 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLSTN1O94985 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLSTN1O94985 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLSTN1O94985 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLSTN1O94985 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLSTN1O94985 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLSTN1O94985 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLSTN1O94985 AL139010.1-201ENST00000454878 894 ntBASIC17.38■□□□□ 0.37
CLSTN1O94985 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.38■□□□□ 0.37
CLSTN1O94985 HLA-J-203ENST00000494367 1087 ntBASIC17.38■□□□□ 0.37
CLSTN1O94985 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.38■□□□□ 0.37
CLSTN1O94985 AC069262.1-201ENST00000539058 672 ntBASIC17.38■□□□□ 0.37
CLSTN1O94985 AC243562.2-201ENST00000561247 970 ntBASIC17.38■□□□□ 0.37
CLSTN1O94985 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.38■□□□□ 0.37
CLSTN1O94985 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.38■□□□□ 0.37
CLSTN1O94985 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.38■□□□□ 0.37
CLSTN1O94985 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.38■□□□□ 0.37
CLSTN1O94985 AC084121.4-201ENST00000641598 221 ntBASIC17.38■□□□□ 0.37
CLSTN1O94985 AF228730.8-201ENST00000642140 221 ntBASIC17.38■□□□□ 0.37
CLSTN1O94985 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.38■□□□□ 0.37
CLSTN1O94985 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CLSTN1O94985 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.38■□□□□ 0.37
CLSTN1O94985 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLSTN1O94985 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLSTN1O94985 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLSTN1O94985 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLSTN1O94985 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CLSTN1O94985 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CLSTN1O94985 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLSTN1O94985 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLSTN1O94985 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLSTN1O94985 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLSTN1O94985 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CLSTN1O94985 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLSTN1O94985 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLSTN1O94985 AC131212.3-201ENST00000624087 4219 ntBASIC17.37■□□□□ 0.37
CLSTN1O94985 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLSTN1O94985 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLSTN1O94985 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLSTN1O94985 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CLSTN1O94985 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLSTN1O94985 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC17.37■□□□□ 0.37
CLSTN1O94985 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLSTN1O94985 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.37■□□□□ 0.37
CLSTN1O94985 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLSTN1O94985 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.37■□□□□ 0.37
CLSTN1O94985 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CLSTN1O94985 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLSTN1O94985 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLSTN1O94985 KLF2P3-201ENST00000451977 1087 ntBASIC17.37■□□□□ 0.37
CLSTN1O94985 AC245100.5-201ENST00000452108 331 ntBASIC17.37■□□□□ 0.37
CLSTN1O94985 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.37■□□□□ 0.37
CLSTN1O94985 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLSTN1O94985 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.37■□□□□ 0.37
CLSTN1O94985 AC105021.1-202ENST00000570572 669 ntBASIC17.37■□□□□ 0.37
CLSTN1O94985 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CLSTN1O94985 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
CLSTN1O94985 AC007967.4-201ENST00000614700 386 ntBASIC17.37■□□□□ 0.37
CLSTN1O94985 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLSTN1O94985 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLSTN1O94985 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CLSTN1O94985 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLSTN1O94985 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CLSTN1O94985 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLSTN1O94985 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.37■□□□□ 0.37
CLSTN1O94985 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.37■□□□□ 0.37
CLSTN1O94985 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC17.37■□□□□ 0.37
CLSTN1O94985 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLSTN1O94985 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLSTN1O94985 LINC02447-202ENST00000501888 2146 ntBASIC17.36■□□□□ 0.37
CLSTN1O94985 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLSTN1O94985 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLSTN1O94985 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLSTN1O94985 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CLSTN1O94985 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.36■□□□□ 0.37
CLSTN1O94985 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.36■□□□□ 0.37
CLSTN1O94985 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.36■□□□□ 0.37
CLSTN1O94985 AC107890.1-201ENST00000422478 521 ntBASIC17.36■□□□□ 0.37
CLSTN1O94985 PMS2P2-201ENST00000425039 1128 ntBASIC17.36■□□□□ 0.37
CLSTN1O94985 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.36■□□□□ 0.37
CLSTN1O94985 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.36■□□□□ 0.37
CLSTN1O94985 AC067863.1-201ENST00000494933 530 ntBASIC17.36■□□□□ 0.37
CLSTN1O94985 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.36■□□□□ 0.37
CLSTN1O94985 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLSTN1O94985 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.36■□□□□ 0.37
CLSTN1O94985 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CLSTN1O94985 AL589739.1-201ENST00000607720 493 ntBASIC17.36■□□□□ 0.37
CLSTN1O94985 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.36■□□□□ 0.37
CLSTN1O94985 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CLSTN1O94985 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CLSTN1O94985 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms