Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GPC4O75487 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.71■□□□□ 0.11
GPC4O75487 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.71■□□□□ 0.11
GPC4O75487 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GPC4O75487 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.71■□□□□ 0.11
GPC4O75487 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GPC4O75487 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.71■□□□□ 0.11
GPC4O75487 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.71■□□□□ 0.11
GPC4O75487 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.71■□□□□ 0.11
GPC4O75487 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.71■□□□□ 0.11
GPC4O75487 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.71■□□□□ 0.11
GPC4O75487 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
GPC4O75487 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
GPC4O75487 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GPC4O75487 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
GPC4O75487 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GPC4O75487 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GPC4O75487 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.71■□□□□ 0.11
GPC4O75487 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
GPC4O75487 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
GPC4O75487 REXO1L1P-202ENST00000608646 1974 ntBASIC15.71■□□□□ 0.1
GPC4O75487 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.71■□□□□ 0.1
GPC4O75487 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
GPC4O75487 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
GPC4O75487 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
GPC4O75487 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.7■□□□□ 0.1
GPC4O75487 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
GPC4O75487 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.7■□□□□ 0.1
GPC4O75487 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.7■□□□□ 0.1
GPC4O75487 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
GPC4O75487 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.7■□□□□ 0.1
GPC4O75487 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
GPC4O75487 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
GPC4O75487 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.7■□□□□ 0.1
GPC4O75487 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.7■□□□□ 0.1
GPC4O75487 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.7■□□□□ 0.1
GPC4O75487 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
GPC4O75487 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.7■□□□□ 0.1
GPC4O75487 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.7■□□□□ 0.1
GPC4O75487 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
GPC4O75487 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.7■□□□□ 0.1
GPC4O75487 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.7■□□□□ 0.1
GPC4O75487 MTND6P24-201ENST00000440466 518 ntBASIC15.7■□□□□ 0.1
GPC4O75487 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.7■□□□□ 0.1
GPC4O75487 KLF2P3-201ENST00000451977 1087 ntBASIC15.7■□□□□ 0.1
GPC4O75487 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.7■□□□□ 0.1
GPC4O75487 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.7■□□□□ 0.1
GPC4O75487 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 AC067863.1-201ENST00000494933 530 ntBASIC15.7■□□□□ 0.1
GPC4O75487 AL079307.3-201ENST00000556114 283 ntBASIC15.7■□□□□ 0.1
GPC4O75487 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.7■□□□□ 0.1
GPC4O75487 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.7■□□□□ 0.1
GPC4O75487 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.7■□□□□ 0.1
GPC4O75487 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.7■□□□□ 0.1
GPC4O75487 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 KRT8P12-202ENST00000472924 1397 ntBASIC15.7■□□□□ 0.1
GPC4O75487 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
GPC4O75487 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
GPC4O75487 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.7■□□□□ 0.1
GPC4O75487 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.7■□□□□ 0.1
GPC4O75487 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
GPC4O75487 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.7■□□□□ 0.1
GPC4O75487 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
GPC4O75487 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
GPC4O75487 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
GPC4O75487 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.69■□□□□ 0.1
GPC4O75487 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GPC4O75487 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GPC4O75487 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
GPC4O75487 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
GPC4O75487 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GPC4O75487 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GPC4O75487 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.69■□□□□ 0.1
GPC4O75487 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
GPC4O75487 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.69■□□□□ 0.1
GPC4O75487 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms