Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE3O75131 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE3O75131 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.06■□□□□ 0
CPNE3O75131 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE3O75131 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.06■□□□□ 0
CPNE3O75131 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.06■□□□□ 0
CPNE3O75131 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.05■□□□□ 0
CPNE3O75131 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
CPNE3O75131 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.05■□□□□ 0
CPNE3O75131 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
CPNE3O75131 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.05■□□□□ 0
CPNE3O75131 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CPNE3O75131 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
CPNE3O75131 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CPNE3O75131 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
CPNE3O75131 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.05■□□□□ 0
CPNE3O75131 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE3O75131 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.05■□□□□ -0
CPNE3O75131 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.05■□□□□ -0
CPNE3O75131 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.05■□□□□ -0
CPNE3O75131 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE3O75131 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.05■□□□□ -0
CPNE3O75131 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.05■□□□□ -0
CPNE3O75131 RPL13P2-201ENST00000440687 659 ntBASIC15.05■□□□□ -0
CPNE3O75131 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.05■□□□□ -0
CPNE3O75131 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.05■□□□□ -0
CPNE3O75131 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.05■□□□□ -0
CPNE3O75131 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.05■□□□□ -0
CPNE3O75131 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.05■□□□□ -0
CPNE3O75131 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.05■□□□□ -0
CPNE3O75131 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.05■□□□□ -0
CPNE3O75131 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.05■□□□□ -0
CPNE3O75131 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.05■□□□□ -0
CPNE3O75131 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.05■□□□□ -0
CPNE3O75131 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE3O75131 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE3O75131 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE3O75131 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.05■□□□□ -0
CPNE3O75131 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
CPNE3O75131 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE3O75131 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE3O75131 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE3O75131 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE3O75131 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CPNE3O75131 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
CPNE3O75131 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.05■□□□□ -0
CPNE3O75131 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.05■□□□□ -0
CPNE3O75131 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.05■□□□□ -0
CPNE3O75131 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE3O75131 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CPNE3O75131 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
CPNE3O75131 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.05■□□□□ -0
CPNE3O75131 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE3O75131 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE3O75131 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE3O75131 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.04■□□□□ -0
CPNE3O75131 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE3O75131 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CPNE3O75131 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE3O75131 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE3O75131 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CPNE3O75131 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.04■□□□□ -0
CPNE3O75131 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE3O75131 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE3O75131 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.04■□□□□ -0
CPNE3O75131 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.04■□□□□ -0
CPNE3O75131 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE3O75131 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.04■□□□□ -0
CPNE3O75131 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE3O75131 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.04■□□□□ -0
CPNE3O75131 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE3O75131 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE3O75131 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.04■□□□□ -0
CPNE3O75131 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.04■□□□□ -0
CPNE3O75131 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.04■□□□□ -0
CPNE3O75131 AC098850.1-201ENST00000419919 790 ntBASIC15.04■□□□□ -0
CPNE3O75131 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CPNE3O75131 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.04■□□□□ -0
CPNE3O75131 TARDBPP1-201ENST00000442013 1203 ntBASIC15.04■□□□□ -0
CPNE3O75131 ATP5G2P4-201ENST00000442175 420 ntBASIC15.04■□□□□ -0
CPNE3O75131 TTTY23B-201ENST00000442790 549 ntBASIC15.04■□□□□ -0
CPNE3O75131 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CPNE3O75131 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.04■□□□□ -0
CPNE3O75131 RN7SL837P-201ENST00000463010 287 ntBASIC15.04■□□□□ -0
CPNE3O75131 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.04■□□□□ -0
CPNE3O75131 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.04■□□□□ -0
CPNE3O75131 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE3O75131 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.04■□□□□ -0
CPNE3O75131 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.04■□□□□ -0
CPNE3O75131 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.04■□□□□ -0
CPNE3O75131 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.04■□□□□ -0
CPNE3O75131 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.04■□□□□ -0
CPNE3O75131 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.04■□□□□ -0
CPNE3O75131 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.04■□□□□ -0
CPNE3O75131 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.04■□□□□ -0
CPNE3O75131 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.04■□□□□ -0
CPNE3O75131 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.04■□□□□ -0
CPNE3O75131 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.04■□□□□ -0
CPNE3O75131 AL008721.1-201ENST00000609964 604 ntBASIC15.04■□□□□ -0
CPNE3O75131 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms