Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CACNA1FO60840 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC19.26■□□□□ 0.67
CACNA1FO60840 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA1FO60840 AC079178.1-201ENST00000420915 656 ntBASIC19.26■□□□□ 0.67
CACNA1FO60840 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA1FO60840 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNA1FO60840 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC19.26■□□□□ 0.67
CACNA1FO60840 AC009542.2-202ENST00000619004 1067 ntBASIC19.26■□□□□ 0.67
CACNA1FO60840 AC138466.3-201ENST00000619983 221 ntBASIC19.26■□□□□ 0.67
CACNA1FO60840 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA1FO60840 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA1FO60840 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNA1FO60840 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA1FO60840 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNA1FO60840 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA1FO60840 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC19.25■□□□□ 0.67
CACNA1FO60840 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CACNA1FO60840 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1FO60840 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1FO60840 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.25■□□□□ 0.67
CACNA1FO60840 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1FO60840 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CACNA1FO60840 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1FO60840 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1FO60840 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1FO60840 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1FO60840 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1FO60840 AC006001.1-201ENST00000325130 474 ntBASIC19.25■□□□□ 0.67
CACNA1FO60840 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC19.25■□□□□ 0.67
CACNA1FO60840 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC19.25■□□□□ 0.67
CACNA1FO60840 MTX1P1-201ENST00000440904 838 ntBASIC19.25■□□□□ 0.67
CACNA1FO60840 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1FO60840 AC007551.1-201ENST00000457394 519 ntBASIC19.25■□□□□ 0.67
CACNA1FO60840 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1FO60840 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.25■□□□□ 0.67
CACNA1FO60840 KLK3-211ENST00000597483 810 ntTSL 2 BASIC19.25■□□□□ 0.67
CACNA1FO60840 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC19.25■□□□□ 0.67
CACNA1FO60840 AC132872.4-202ENST00000622924 2756 ntBASIC19.25■□□□□ 0.67
CACNA1FO60840 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1FO60840 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1FO60840 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1FO60840 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.25■□□□□ 0.67
CACNA1FO60840 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
CACNA1FO60840 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1FO60840 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1FO60840 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1FO60840 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC19.25■□□□□ 0.67
CACNA1FO60840 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1FO60840 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
CACNA1FO60840 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
CACNA1FO60840 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1FO60840 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1FO60840 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1FO60840 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.24■□□□□ 0.67
CACNA1FO60840 STX1A-203ENST00000395155 783 ntTSL 2 BASIC19.24■□□□□ 0.67
CACNA1FO60840 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1FO60840 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CACNA1FO60840 AL354877.1-201ENST00000424412 413 ntBASIC19.24■□□□□ 0.67
CACNA1FO60840 AC245100.3-201ENST00000441281 285 ntBASIC19.24■□□□□ 0.67
CACNA1FO60840 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC19.24■□□□□ 0.67
CACNA1FO60840 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1FO60840 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC19.24■□□□□ 0.67
CACNA1FO60840 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC19.24■□□□□ 0.67
CACNA1FO60840 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC19.24■□□□□ 0.67
CACNA1FO60840 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1FO60840 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1FO60840 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1FO60840 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC19.24■□□□□ 0.67
CACNA1FO60840 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1FO60840 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1FO60840 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CACNA1FO60840 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1FO60840 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC19.24■□□□□ 0.67
CACNA1FO60840 GPI-205ENST00000586425 1799 ntTSL 5 BASIC19.24■□□□□ 0.67
CACNA1FO60840 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CACNA1FO60840 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CACNA1FO60840 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC19.24■□□□□ 0.67
CACNA1FO60840 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1FO60840 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1FO60840 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CACNA1FO60840 MECR-202ENST00000373791 2416 ntTSL 2 BASIC19.24■□□□□ 0.67
CACNA1FO60840 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1FO60840 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CACNA1FO60840 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1FO60840 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1FO60840 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1FO60840 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.24■□□□□ 0.67
CACNA1FO60840 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC19.24■□□□□ 0.67
CACNA1FO60840 BNIP3P42-201ENST00000454982 569 ntBASIC19.24■□□□□ 0.67
CACNA1FO60840 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1FO60840 AC022616.1-201ENST00000518688 554 ntBASIC19.24■□□□□ 0.67
CACNA1FO60840 MFF-223ENST00000524634 647 ntTSL 2 BASIC19.24■□□□□ 0.67
CACNA1FO60840 BNIP3P29-201ENST00000598302 571 ntBASIC19.24■□□□□ 0.67
CACNA1FO60840 Six3os1_5.1-201ENST00000611000 271 ntBASIC19.24■□□□□ 0.67
CACNA1FO60840 AC011447.5-201ENST00000616168 564 ntBASIC19.24■□□□□ 0.67
CACNA1FO60840 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1FO60840 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1FO60840 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CACNA1FO60840 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
CACNA1FO60840 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms