Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PDE6DO43924 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PDE6DO43924 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
PDE6DO43924 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
PDE6DO43924 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
PDE6DO43924 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
PDE6DO43924 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.14□□□□□ -0.47
PDE6DO43924 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PDE6DO43924 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC12.14□□□□□ -0.47
PDE6DO43924 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC12.14□□□□□ -0.47
PDE6DO43924 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.14□□□□□ -0.47
PDE6DO43924 GPX1P2-201ENST00000429271 606 ntBASIC12.14□□□□□ -0.47
PDE6DO43924 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.14□□□□□ -0.47
PDE6DO43924 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PDE6DO43924 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.14□□□□□ -0.47
PDE6DO43924 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.14□□□□□ -0.47
PDE6DO43924 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC12.14□□□□□ -0.47
PDE6DO43924 CIB2-208ENST00000560618 804 ntTSL 2 BASIC12.14□□□□□ -0.47
PDE6DO43924 AL136038.3-201ENST00000561909 1096 ntBASIC12.14□□□□□ -0.47
PDE6DO43924 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
PDE6DO43924 NKAPP1-205ENST00000585790 367 ntBASIC12.14□□□□□ -0.47
PDE6DO43924 AC011467.4-201ENST00000594891 528 ntBASIC12.14□□□□□ -0.47
PDE6DO43924 AC092329.2-201ENST00000598402 547 ntBASIC12.14□□□□□ -0.47
PDE6DO43924 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC12.14□□□□□ -0.47
PDE6DO43924 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC12.14□□□□□ -0.47
PDE6DO43924 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PDE6DO43924 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.14□□□□□ -0.47
PDE6DO43924 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.14□□□□□ -0.47
PDE6DO43924 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC12.14□□□□□ -0.47
PDE6DO43924 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
PDE6DO43924 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
PDE6DO43924 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.14□□□□□ -0.47
PDE6DO43924 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
PDE6DO43924 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PDE6DO43924 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.14□□□□□ -0.47
PDE6DO43924 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.14□□□□□ -0.47
PDE6DO43924 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.14□□□□□ -0.47
PDE6DO43924 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PDE6DO43924 CICP17-201ENST00000418553 2377 ntBASIC12.14□□□□□ -0.47
PDE6DO43924 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PDE6DO43924 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.14□□□□□ -0.47
PDE6DO43924 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PDE6DO43924 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.14□□□□□ -0.47
PDE6DO43924 TCAF1P1-201ENST00000414990 2232 ntBASIC12.14□□□□□ -0.47
PDE6DO43924 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PDE6DO43924 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PDE6DO43924 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.14□□□□□ -0.47
PDE6DO43924 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
PDE6DO43924 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PDE6DO43924 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.14□□□□□ -0.47
PDE6DO43924 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PDE6DO43924 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
PDE6DO43924 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.13□□□□□ -0.47
PDE6DO43924 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
PDE6DO43924 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PDE6DO43924 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PDE6DO43924 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
PDE6DO43924 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
PDE6DO43924 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
PDE6DO43924 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.13□□□□□ -0.47
PDE6DO43924 MTHFR-210ENST00000641407 2387 ntBASIC12.13□□□□□ -0.47
PDE6DO43924 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.13□□□□□ -0.47
PDE6DO43924 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PDE6DO43924 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PDE6DO43924 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
PDE6DO43924 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
PDE6DO43924 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
PDE6DO43924 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.13□□□□□ -0.47
PDE6DO43924 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
PDE6DO43924 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC12.13□□□□□ -0.47
PDE6DO43924 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
PDE6DO43924 TOB2P1-201ENST00000469761 992 ntBASIC12.13□□□□□ -0.47
PDE6DO43924 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
PDE6DO43924 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.13□□□□□ -0.47
PDE6DO43924 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
PDE6DO43924 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC12.13□□□□□ -0.47
PDE6DO43924 MIR4515-201ENST00000584082 81 ntBASIC12.13□□□□□ -0.47
PDE6DO43924 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PDE6DO43924 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
PDE6DO43924 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.13□□□□□ -0.47
PDE6DO43924 AC011474.4-201ENST00000623523 2076 ntBASIC12.13□□□□□ -0.47
PDE6DO43924 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PDE6DO43924 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.13□□□□□ -0.47
PDE6DO43924 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
PDE6DO43924 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
PDE6DO43924 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PDE6DO43924 CYP51A1P2-201ENST00000419457 1499 ntBASIC12.13□□□□□ -0.47
PDE6DO43924 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.13□□□□□ -0.47
PDE6DO43924 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.13□□□□□ -0.47
PDE6DO43924 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
PDE6DO43924 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
PDE6DO43924 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
PDE6DO43924 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PDE6DO43924 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
PDE6DO43924 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.13□□□□□ -0.47
PDE6DO43924 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PDE6DO43924 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PDE6DO43924 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PDE6DO43924 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
PDE6DO43924 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 1013 ms