Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RIPK2O43353 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.87■□□□□ 0.13
RIPK2O43353 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
RIPK2O43353 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RIPK2O43353 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RIPK2O43353 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RIPK2O43353 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RIPK2O43353 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RIPK2O43353 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RIPK2O43353 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RIPK2O43353 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RIPK2O43353 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.86■□□□□ 0.13
RIPK2O43353 AC113367.3-201ENST00000508316 1912 ntBASIC15.86■□□□□ 0.13
RIPK2O43353 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RIPK2O43353 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RIPK2O43353 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RIPK2O43353 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RIPK2O43353 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RIPK2O43353 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RIPK2O43353 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RIPK2O43353 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.86■□□□□ 0.13
RIPK2O43353 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RIPK2O43353 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RIPK2O43353 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RIPK2O43353 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RIPK2O43353 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.86■□□□□ 0.13
RIPK2O43353 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RIPK2O43353 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.86■□□□□ 0.13
RIPK2O43353 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.86■□□□□ 0.13
RIPK2O43353 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.86■□□□□ 0.13
RIPK2O43353 AC112191.1-201ENST00000523689 701 ntBASIC15.86■□□□□ 0.13
RIPK2O43353 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.86■□□□□ 0.13
RIPK2O43353 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.86■□□□□ 0.13
RIPK2O43353 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.86■□□□□ 0.13
RIPK2O43353 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RIPK2O43353 AC064836.3-201ENST00000607928 673 ntBASIC15.86■□□□□ 0.13
RIPK2O43353 Z83851.2-201ENST00000609564 659 ntBASIC15.86■□□□□ 0.13
RIPK2O43353 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
RIPK2O43353 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.86■□□□□ 0.13
RIPK2O43353 AC018529.2-202ENST00000611482 3087 ntBASIC15.86■□□□□ 0.13
RIPK2O43353 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RIPK2O43353 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.86■□□□□ 0.13
RIPK2O43353 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RIPK2O43353 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RIPK2O43353 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RIPK2O43353 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RIPK2O43353 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.86■□□□□ 0.13
RIPK2O43353 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RIPK2O43353 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RIPK2O43353 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RIPK2O43353 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RIPK2O43353 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RIPK2O43353 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RIPK2O43353 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RIPK2O43353 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RIPK2O43353 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RIPK2O43353 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RIPK2O43353 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
RIPK2O43353 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RIPK2O43353 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RIPK2O43353 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RIPK2O43353 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RIPK2O43353 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RIPK2O43353 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RIPK2O43353 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RIPK2O43353 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RIPK2O43353 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.85■□□□□ 0.13
RIPK2O43353 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.85■□□□□ 0.13
RIPK2O43353 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.85■□□□□ 0.13
RIPK2O43353 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RIPK2O43353 KRT18P2-201ENST00000447938 1258 ntBASIC15.85■□□□□ 0.13
RIPK2O43353 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.85■□□□□ 0.13
RIPK2O43353 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.85■□□□□ 0.13
RIPK2O43353 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.85■□□□□ 0.13
RIPK2O43353 RNA5SP419-201ENST00000515908 135 ntBASIC15.85■□□□□ 0.13
RIPK2O43353 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.85■□□□□ 0.13
RIPK2O43353 PDPK2P-202ENST00000562415 1191 ntBASIC15.85■□□□□ 0.13
RIPK2O43353 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
RIPK2O43353 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.85■□□□□ 0.13
RIPK2O43353 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.85■□□□□ 0.13
RIPK2O43353 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RIPK2O43353 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RIPK2O43353 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RIPK2O43353 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RIPK2O43353 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.85■□□□□ 0.13
RIPK2O43353 AKAP8P1-201ENST00000434743 1349 ntBASIC15.85■□□□□ 0.13
RIPK2O43353 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RIPK2O43353 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RIPK2O43353 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
RIPK2O43353 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RIPK2O43353 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RIPK2O43353 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
RIPK2O43353 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RIPK2O43353 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.85■□□□□ 0.13
RIPK2O43353 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RIPK2O43353 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.85■□□□□ 0.13
RIPK2O43353 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.85■□□□□ 0.13
RIPK2O43353 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RIPK2O43353 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.85■□□□□ 0.13
RIPK2O43353 AL928921.2-201ENST00000641325 2442 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms