Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 CALM3-211ENST00000598871 561 ntTSL 4 BASIC10.73□□□□□ -0.69
NDUFA1O15239 AC023141.13-201ENST00000604991 943 ntBASIC10.73□□□□□ -0.69
NDUFA1O15239 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC10.73□□□□□ -0.69
NDUFA1O15239 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
NDUFA1O15239 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
NDUFA1O15239 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
NDUFA1O15239 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
NDUFA1O15239 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC10.73□□□□□ -0.69
NDUFA1O15239 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
NDUFA1O15239 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC10.73□□□□□ -0.69
NDUFA1O15239 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
NDUFA1O15239 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC10.73□□□□□ -0.69
NDUFA1O15239 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 SRC-202ENST00000373558 4304 ntTSL 5 BASIC10.73□□□□□ -0.69
NDUFA1O15239 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
NDUFA1O15239 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
NDUFA1O15239 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC10.73□□□□□ -0.69
NDUFA1O15239 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
NDUFA1O15239 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
NDUFA1O15239 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC10.73□□□□□ -0.69
NDUFA1O15239 FLII-221ENST00000578558 2377 ntTSL 5 BASIC10.73□□□□□ -0.69
NDUFA1O15239 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC10.73□□□□□ -0.69
NDUFA1O15239 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NDUFA1O15239 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC10.72□□□□□ -0.69
NDUFA1O15239 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
NDUFA1O15239 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
NDUFA1O15239 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC10.72□□□□□ -0.69
NDUFA1O15239 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC10.72□□□□□ -0.69
NDUFA1O15239 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
NDUFA1O15239 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
NDUFA1O15239 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC10.72□□□□□ -0.69
NDUFA1O15239 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC10.72□□□□□ -0.69
NDUFA1O15239 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC10.72□□□□□ -0.69
NDUFA1O15239 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
NDUFA1O15239 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC10.72□□□□□ -0.69
NDUFA1O15239 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC10.72□□□□□ -0.69
NDUFA1O15239 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
NDUFA1O15239 NMU-203ENST00000507338 658 ntTSL 3 BASIC10.72□□□□□ -0.69
NDUFA1O15239 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC10.72□□□□□ -0.69
NDUFA1O15239 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC10.72□□□□□ -0.69
NDUFA1O15239 POLD4-207ENST00000531239 584 ntTSL 2 BASIC10.72□□□□□ -0.69
NDUFA1O15239 AC096734.2-201ENST00000562054 433 ntBASIC10.72□□□□□ -0.69
NDUFA1O15239 MIR4321-201ENST00000592276 80 ntBASIC10.72□□□□□ -0.69
NDUFA1O15239 AL009183.1-201ENST00000603760 355 ntBASIC10.72□□□□□ -0.69
NDUFA1O15239 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
NDUFA1O15239 AL078644.1-201ENST00000609881 752 ntBASIC10.72□□□□□ -0.69
NDUFA1O15239 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC10.72□□□□□ -0.69
NDUFA1O15239 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC10.72□□□□□ -0.69
NDUFA1O15239 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
NDUFA1O15239 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 PMS2P7-201ENST00000506558 1336 ntBASIC10.72□□□□□ -0.69
NDUFA1O15239 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
NDUFA1O15239 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC10.72□□□□□ -0.69
NDUFA1O15239 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
NDUFA1O15239 PEG13-201ENST00000631594 5667 ntBASIC10.72□□□□□ -0.69
NDUFA1O15239 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
NDUFA1O15239 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC10.72□□□□□ -0.69
NDUFA1O15239 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms